[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Francisella tularensis subsp. mediasiatica FSC147 (ftul2)
Gene : rubA
DDBJ      :rubA         rubredoxin
Swiss-Prot:             

Homologs  Archaea  20/68 : Bacteria  353/915 : Eukaryota  1/199 : Viruses  0/175   --->[See Alignment]
g.41.5
:56 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   2->55 2kn9A PDBj 4e-21 61.1 %
:RPS:PDB   4->56 1bfyA PDBj 6e-11 54.7 %
:RPS:SCOP  4->56 1b13A  g.41.5.1 * 3e-10 52.8 %
:HMM:SCOP  4->56 1qcvA_ g.41.5.1 * 3e-19 64.2 %
:RPS:PFM   5->51 PF00301 * Rubredoxin 3e-11 59.6 %
:HMM:PFM   5->51 PF00301 * Rubredoxin 1.7e-25 59.6 47/47  
:BLT:SWISS 4->55 RUBR_ACIAD 1e-24 75.0 %
:PROS 35->45|PS00202|RUBREDOXIN

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ACD30653.1 GT:GENE rubA GT:PRODUCT rubredoxin GT:DATABASE GIB00719CH01 GT:ORG ftul2 GB:ACCESSION GIB00719CH01 GB:LOCATION complement(734400..734570) GB:FROM 734400 GB:TO 734570 GB:DIRECTION - GB:GENE rubA GB:PRODUCT rubredoxin GB:PROTEIN_ID ACD30653.1 GB:DB_XREF GI:187712356 GB:GENE:GENE rubA LENGTH 56 SQ:AASEQ MEYRKYICIVCGLIYDEAEGWPEDGIEPGTRWEDVPEDWECPDCGVSKDEFELLEE GT:EXON 1|1-56:0| BL:SWS:NREP 1 BL:SWS:REP 4->55|RUBR_ACIAD|1e-24|75.0|52/54| PROS 35->45|PS00202|RUBREDOXIN|PDOC00179| BL:PDB:NREP 1 BL:PDB:REP 2->55|2kn9A|4e-21|61.1|54/81| RP:PDB:NREP 1 RP:PDB:REP 4->56|1bfyA|6e-11|54.7|53/54| RP:PFM:NREP 1 RP:PFM:REP 5->51|PF00301|3e-11|59.6|47/47|Rubredoxin| HM:PFM:NREP 1 HM:PFM:REP 5->51|PF00301|1.7e-25|59.6|47/47|Rubredoxin| GO:PFM:NREP 2 GO:PFM GO:0009055|"GO:electron carrier activity"|PF00301|IPR004039| GO:PFM GO:0046872|"GO:metal ion binding"|PF00301|IPR004039| RP:SCP:NREP 1 RP:SCP:REP 4->56|1b13A|3e-10|52.8|53/54|g.41.5.1| HM:SCP:REP 4->56|1qcvA_|3e-19|64.2|53/53|g.41.5.1|1/1|Rubredoxin-like| OP:NHOMO 519 OP:NHOMOORG 374 OP:PATTERN ----------------1------2--------122121-----1412-21----11--111---1--- -----------1--12-22-22--4122222411122425-----------------------------------------1--------11---------------------------------21111111111-----------1--11---111111-1----2221-2-----2---------111------------------------------------------------------------------------------------------------------------------------------------1111322222223211-111222-1121-1-1-2241--111311111---2-3111--------1-----1---------------11-11-1--------------------1------------------------2-------------------------------------111112222222221222342122223333223121111411111321121121-1111111111111-2--1211222-11112-212112112-----121--------------------1---1--1---3------------11------11-1----1212------1----1-111-111111-111111111-11111111111111---1111111111-11111-1111111-----------------1111111111121-----------------21212111111-222212114212111111111111111---1--------1111111111111111-12---------------1---------------------------1211211111--- -1----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 56 STR:RPRED 100.0 SQ:SECSTR ccccEEccccccccccTTTccTTTTccTTccTTTccTTcccTTcccccccccEEcc PSIPRED ccccEEEEccccEEEccccccccccccccccHHHcccccccccccccHHHcEEccc //