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Francisella tularensis subsp. mediasiatica FSC147 (ftul2)
Gene : sspA
DDBJ      :sspA         stringent starvation protein A, regulator of transcription
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  293/915 : Eukaryota  6/199 : Viruses  0/175   --->[See Alignment]
a.45.1c.47.1
:210 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   4->205 1yy7B PDBj 1e-21 32.8 %
:RPS:PDB   3->192 3ee2A PDBj 7e-25 14.4 %
:RPS:SCOP  1->82 1g6wA2  c.47.1.5 * 1e-14 17.1 %
:RPS:SCOP  80->192 1gsqA1  a.45.1.1 * 2e-14 14.2 %
:HMM:SCOP  2->104 1z9hA2 c.47.1.5 * 5.9e-19 37.3 %
:HMM:SCOP  74->193 1k0mA1 a.45.1.1 * 2.6e-23 31.1 %
:RPS:PFM   115->187 PF00043 * GST_C 3e-04 26.0 %
:HMM:PFM   110->187 PF00043 * GST_C 2e-13 22.1 77/95  
:HMM:PFM   4->34 PF00462 * Glutaredoxin 4.5e-07 25.8 31/60  
:BLT:SWISS 4->188 SSPA_HAESO 9e-27 36.3 %
:TM

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ACD31275.1 GT:GENE sspA GT:PRODUCT stringent starvation protein A, regulator of transcription GT:DATABASE GIB00719CH01 GT:ORG ftul2 GB:ACCESSION GIB00719CH01 GB:LOCATION complement(1555092..1555724) GB:FROM 1555092 GB:TO 1555724 GB:DIRECTION - GB:GENE sspA GB:PRODUCT stringent starvation protein A, regulator of transcription GB:PROTEIN_ID ACD31275.1 GB:DB_XREF GI:187712978 GB:GENE:GENE sspA LENGTH 210 SQ:AASEQ MMKVTLYTTKYCPYSLRARIALAEKKMSTDIVEAGDLEPAMIKKIAPSGVFPVLMEKDYSINNRKALLIYIDERFPAPSLLPNVVNERIKIRLSLDKIDNEWYPVLDQIRKHRSDQKMLESMFKDLKESLLAMEKAFTGSEFFISSGFTLADCYIAALIICLEAEGFIIDDEYGAIYEYKKRLFARDSVKKANIKGGAGESLLKTLRTHR GT:EXON 1|1-210:0| BL:SWS:NREP 1 BL:SWS:REP 4->188|SSPA_HAESO|9e-27|36.3|182/212| TM:NTM 1 TM:REGION 145->167| BL:PDB:NREP 1 BL:PDB:REP 4->205|1yy7B|1e-21|32.8|198/204| RP:PDB:NREP 1 RP:PDB:REP 3->192|3ee2A|7e-25|14.4|188/198| RP:PFM:NREP 1 RP:PFM:REP 115->187|PF00043|3e-04|26.0|73/98|GST_C| HM:PFM:NREP 2 HM:PFM:REP 110->187|PF00043|2e-13|22.1|77/95|GST_C| HM:PFM:REP 4->34|PF00462|4.5e-07|25.8|31/60|Glutaredoxin| RP:SCP:NREP 2 RP:SCP:REP 1->82|1g6wA2|1e-14|17.1|82/101|c.47.1.5| RP:SCP:REP 80->192|1gsqA1|2e-14|14.2|113/127|a.45.1.1| HM:SCP:REP 2->104|1z9hA2|5.9e-19|37.3|102/0|c.47.1.5|1/1|Thioredoxin-like| HM:SCP:REP 74->193|1k0mA1|2.6e-23|31.1|119/149|a.45.1.1|1/1|Glutathione S-transferase (GST), C-terminal domain| OP:NHOMO 305 OP:NHOMOORG 299 OP:PATTERN -------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------------------------------------1------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------11-------11-11-----------------------1------------------------------11111111111111111111111111111111111111111111111111111111111111111111111-----------------------------1---------------------------11111111111111111111111111111111--11111------11111111111111111-1111111111111111111111111111111111111111111111111111-111111111111--11111111111111111111111111111111111111-11--2212111111111111111111111111111111111111111111111111111----------------------------------------------------------- -----------------1-----------------------------1-------------------------------------------------------1---------------------------------------------------------------------------------4---11-------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 209 STR:RPRED 99.5 SQ:SECSTR cccEEEEEEcccTTTHHHHHHHHHHTcccEEEEEcGGGHHHHHTTcTTccccEEEETTEEEEcHHHHHHHHHTTcGGGcccHHHHHHHHHHHHHHHHHHTTccTTHHcccHHHHHHHHHHHHHHTHHHHHHHHHHHHTTcccccTTcccHHHHHHHHHHHHHHHHcTTTTTTcHHHHHHHHHHHHcHHHHHHTTcccccccccccTTcT# PSIPRED cccEEEEEccccHHHHHHHHHHHHccccEEEEEccccccHHHHHccccccccEEEEccEEEEEHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHccHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHccHHHHHHcccccccHHHHHHHHHHc //