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Francisella tularensis subsp. mediasiatica FSC147 (ftul2)
Gene : truB
DDBJ      :truB         tRNA pseudouridine synthase B
Swiss-Prot:TRUB_FRATW   RecName: Full=tRNA pseudouridine synthase B;         EC=5.4.99.-;AltName: Full=tRNA pseudouridine 55 synthase;         Short=Psi55 synthase;AltName: Full=tRNA-uridine isomerase;AltName: Full=tRNA pseudouridylate synthase;

Homologs  Archaea  65/68 : Bacteria  885/915 : Eukaryota  192/199 : Viruses  0/175   --->[See Alignment]
d.265.1
:302 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   6->284 1k8wA PDBj 8e-57 43.1 %
:RPS:PDB   9->289 2ab4A PDBj 1e-41 32.0 %
:RPS:SCOP  9->234 1k8wA5  d.265.1.2 * 4e-53 46.4 %
:HMM:SCOP  6->239 1k8wA5 d.265.1.2 * 4.7e-79 50.9 %
:RPS:PFM   32->179 PF01509 * TruB_N 1e-48 60.5 %
:HMM:PFM   30->179 PF01509 * TruB_N 4.4e-64 59.7 149/149  
:HMM:PFM   261->289 PF09157 * TruB-C_2 0.00052 27.6 29/58  
:BLT:SWISS 1->302 TRUB_FRATW e-169 99.3 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ACD30395.1 GT:GENE truB GT:PRODUCT tRNA pseudouridine synthase B GT:DATABASE GIB00719CH01 GT:ORG ftul2 GB:ACCESSION GIB00719CH01 GB:LOCATION 381800..382708 GB:FROM 381800 GB:TO 382708 GB:DIRECTION + GB:GENE truB GB:PRODUCT tRNA pseudouridine synthase B GB:PROTEIN_ID ACD30395.1 GB:DB_XREF GI:187712098 GB:GENE:GENE truB LENGTH 302 SQ:AASEQ MKKNRLNLNGVVVINKAKDISSNKVLQQLKYLFNAQKAGHTGTLDPMATGVLPICFGRATKIAQYLLDADKEYIATIRLGIETDSGDAEGEIIAKSINIPELSAEYLETVLAKFRGDVVQIPPMYSALKYNGQPLYKLAREGKTVEVKSRNIKIYELELLEFNIDSLKIRVKCSKGTYIRSLAIDIGKTLGCGGHLIALQRTQSGPFKLSEAFRLEQLKDLSFEQKIASITNIESVFIDKPIYSLLEEEKDDLYKRGLFADKPHLDGTVRIYDVEKFVAIAEFDKGKLINKKFFDLDILISE GT:EXON 1|1-302:0| SW:ID TRUB_FRATW SW:DE RecName: Full=tRNA pseudouridine synthase B; EC=5.4.99.-;AltName: Full=tRNA pseudouridine 55 synthase; Short=Psi55 synthase;AltName: Full=tRNA-uridine isomerase;AltName: Full=tRNA pseudouridylate synthase; SW:GN Name=truB; OrderedLocusNames=FTW_0373; SW:KW Complete proteome; Isomerase; tRNA processing. SW:EXACT F SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->302|TRUB_FRATW|e-169|99.3|302/302| GO:SWS:NREP 2 GO:SWS GO:0016853|"GO:isomerase activity"|Isomerase| GO:SWS GO:0008033|"GO:tRNA processing"|tRNA processing| BL:PDB:NREP 1 BL:PDB:REP 6->284|1k8wA|8e-57|43.1|276/304| RP:PDB:NREP 1 RP:PDB:REP 9->289|2ab4A|1e-41|32.0|275/300| RP:PFM:NREP 1 RP:PFM:REP 32->179|PF01509|1e-48|60.5|147/149|TruB_N| HM:PFM:NREP 2 HM:PFM:REP 30->179|PF01509|4.4e-64|59.7|149/149|TruB_N| HM:PFM:REP 261->289|PF09157|0.00052|27.6|29/58|TruB-C_2| GO:PFM:NREP 1 GO:PFM GO:0006396|"GO:RNA processing"|PF01509|IPR002501| RP:SCP:NREP 1 RP:SCP:REP 9->234|1k8wA5|4e-53|46.4|224/242|d.265.1.2| HM:SCP:REP 6->239|1k8wA5|4.7e-79|50.9|232/242|d.265.1.2|1/1|Pseudouridine synthase| OP:NHOMO 1367 OP:NHOMOORG 1142 OP:PATTERN 111111--1111111-1111111111111111111111111111111111111111111111111111 1111111111111111111-11111111111111111111111111111111111111111111111111111111111111111111111111-11--111111111-1-1111111-111111111111111111111111111111111111111111111111111111111111111111111111111-1111111111111111111111111111111111111111111111111111111111-11111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111-11111111111-11111111111111111111111111111111111111111111111111111111111111111111---1-11111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111211111111111111-1-------1111111111111111111111111111111-111111-1111111111111111111111111111-11111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111-11111111111111111111111111111111111111111111111111111111111111111111111-111111-111111-111111111111111111 2211122-41111111232222222222222222212222222222222222221221222222222212222222212222222222-2222222222212221312422231-232221232411226F2-42421-1312221222-31122232213421121511-11212232H2222233443222222223 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 292 STR:RPRED 96.7 SQ:SECSTR cGGGccEEcEEEEEEEcccccHHHHHHHHHHHTTcccEEEcccccTTcEEEEEEEEGGGGGGGGGGTTccEEEEEEEEETEEETTccTTccEEEccccccHcEEHHHHHHHHTTcEEEEEccccccccccccccHHHHHHTTcccccccEEEEEEEEEEEEEETTEEEEEEEEcTTccHHHHHHHHHHHHTccEEEEEEEEEEETTEETTTcccTTTcHcHHHHHHHcccEEGGGccTTccEEEEcTTTHHHHTTcccEccccccccEEEEEETTcccEEEEEccccccHcc########## DISOP:02AL 302-303| PSIPRED cccccccccEEEEEEccccccHHHHHHHHHHHHcccccEEccccccccccEEEEEEcccHHHHHHHHcccEEEEEEEEEEEEEccccccccEEEEEcccccccHHHHHHHHHHHcccEEEccccEEEEEEccHHHHHHHHcccEEEccccEEEEEEEEEEEEEccEEEEEEEEcccccHHHHHHHHHHHccccEEEEEEEEEEEccccHHHcccHHHHHHcccccHHHHcccHHHHHHcccEEEEcHHHHHHHHcccEEccccccccEEEEEEccEEEEEEEEEccEEEEEEEEEcccEEEc //