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Francisella tularensis subsp. mediasiatica FSC147 (ftul2)
Gene : xerD
DDBJ      :xerD         tyrosine recombinase XerD
Swiss-Prot:             

Homologs  Archaea  39/68 : Bacteria  814/915 : Eukaryota  1/199 : Viruses  0/175   --->[See Alignment]
a.60.9d.163.1
:292 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   5->33,107->286 1a0pA PDBj 4e-49 52.8 %
:RPS:PDB   5->286 1a0pA PDBj 8e-34 44.1 %
:RPS:SCOP  4->90 1crxA1  a.60.9.1 * 1e-13 9.2 %
:RPS:SCOP  108->290 1aihA  d.163.1.1 * 1e-30 27.6 %
:HMM:SCOP  2->95 1a0pA1 a.60.9.1 * 1.2e-22 40.7 %
:HMM:SCOP  101->290 4crxA2 d.163.1.1 * 3.9e-59 46.5 %
:RPS:PFM   7->85 PF02899 * Phage_integr_N 3e-11 43.6 %
:RPS:PFM   112->277 PF00589 * Phage_integrase 1e-27 43.0 %
:HMM:PFM   108->279 PF00589 * Phage_integrase 3e-54 43.1 167/173  
:HMM:PFM   5->84 PF02899 * Phage_integr_N 8.4e-22 37.5 80/84  
:BLT:SWISS 5->292 XERD_PROMI 4e-72 46.5 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ACD30299.1 GT:GENE xerD GT:PRODUCT tyrosine recombinase XerD GT:DATABASE GIB00719CH01 GT:ORG ftul2 GB:ACCESSION GIB00719CH01 GB:LOCATION 242702..243580 GB:FROM 242702 GB:TO 243580 GB:DIRECTION + GB:GENE xerD GB:PRODUCT tyrosine recombinase XerD GB:PROTEIN_ID ACD30299.1 GB:DB_XREF GI:187712002 GB:GENE:GENE xerD LENGTH 292 SQ:AASEQ MSSAVDAFLDNLWLEHGLSQNTISSYRTDLKFLQNYFAKTDLISLDFEQLYAFISYRSKNGYSSHSNARMISTLRKFYAWLISTGQTNNNPTAKLTLPKLAKKLPKDMTETDVERLLQAPDMTEDVGIRDKAMLELMYATGLRVSELVGLNIDDIDINIGVIQVMGKGSKERIVPIGEYALEYLQKYFAEARRSLSKNFKEKAVFISKHAKRITRQSFWHRIKNYALIAGINTDISPHTLRHAFATHLLNHGADLRSVQLLLGHSNVSTTTIYTHISQNRLQEIYQKHHPRG GT:EXON 1|1-292:0| BL:SWS:NREP 1 BL:SWS:REP 5->292|XERD_PROMI|4e-72|46.5|288/313| SEG 91->106|ptakltlpklakklpk| SEG 147->162|lvglniddidinigvi| BL:PDB:NREP 1 BL:PDB:REP 5->33,107->286|1a0pA|4e-49|52.8|207/271| RP:PDB:NREP 1 RP:PDB:REP 5->286|1a0pA|8e-34|44.1|263/271| RP:PFM:NREP 2 RP:PFM:REP 7->85|PF02899|3e-11|43.6|78/84|Phage_integr_N| RP:PFM:REP 112->277|PF00589|1e-27|43.0|158/168|Phage_integrase| HM:PFM:NREP 2 HM:PFM:REP 108->279|PF00589|3e-54|43.1|167/173|Phage_integrase| HM:PFM:REP 5->84|PF02899|8.4e-22|37.5|80/84|Phage_integr_N| GO:PFM:NREP 5 GO:PFM GO:0003677|"GO:DNA binding"|PF02899|IPR004107| GO:PFM GO:0015074|"GO:DNA integration"|PF02899|IPR004107| GO:PFM GO:0003677|"GO:DNA binding"|PF00589|IPR002104| GO:PFM GO:0006310|"GO:DNA recombination"|PF00589|IPR002104| GO:PFM GO:0015074|"GO:DNA integration"|PF00589|IPR002104| RP:SCP:NREP 2 RP:SCP:REP 4->90|1crxA1|1e-13|9.2|87/110|a.60.9.1| RP:SCP:REP 108->290|1aihA|1e-30|27.6|156/170|d.163.1.1| HM:SCP:REP 2->95|1a0pA1|1.2e-22|40.7|91/0|a.60.9.1|1/1|lambda integrase-like, N-terminal domain| HM:SCP:REP 101->290|4crxA2|3.9e-59|46.5|187/212|d.163.1.1|1/1|DNA breaking-rejoining enzymes| OP:NHOMO 2214 OP:NHOMOORG 854 OP:PATTERN 11111111111111112---------------111----422-11111---1--1111111111---- 22A2322222222322422-232232222222432322412234122222222222222223522321--2222222332221--111343223222--52835332222222222222222222232233222321111124642427---------1----2--21-41-------------211222233234344233245333632332223475792442222324232222222222222222222233322323332244223322221131111---1112112322222211111111111111111112111374335433534452324423222321321855439824164222243-232A622222222223223222323222222222222-322233232D23222422EC2245222227222222322333333336222232222222222222222222222222222222-222422222722222322222224D2222222432265222333333323433222533322-22222224348332263-22423422232224323432222232313111---1--1111111113121265242461-23333269342423342824234--24323------33442334447455624-422574446245533333255482CG32222252222232225742233322-222222222222---2------1--2222-2222222222122223233422222232232332323333246722222222223337333433334422233333332222--33442222--------322------1--1--------1-1-11-1111112111262 --------------------------------------------------------------------------------------------------------------------------------------------------------------------------1---------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 291 STR:RPRED 99.7 SQ:SECSTR cccHHHHHHHHHHHTTcccHHHHHHHHHHHHHHHHHHHHTcccTTTHHHHHHHHHccccTTccHHcHHHHHHHHHHHHHHHHHTTcccccTTcccccccccccccccccHHHHHHHHHcccTTcHHHHHHHHHHHHHHHHcccHHHHTTccGGGEETTTTEEEEEcccccEEEEEccHHHHHHHHHHHHHTHHHHHTTcccccccccTTcccccHHHHHHHHHHHHHHTTccGGccHHHHHHHHHHHHHHHccccGGGccccccccHcHHHHHHHHHHHHHHHHHcGGGTH# PSIPRED cHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHccccHHHccHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccHHHHHHHHHHHcccccccHHHHHHHHHHHHHcccHHHHHcccHHHccccccEEEEEcccccEEEEEccHHHHHHHHHHHHHHHHHcccccccccEEEccccccccHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHccccHHHHHHHHccccHHHHHHHHHccHHHHHHHHHHHcccc //