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Halobacterium sp. NRC-1 (halo0)
Gene : fumC
DDBJ      :fumC         fumarate hydratase
Swiss-Prot:FUMC_HALSA   RecName: Full=Fumarate hydratase class II;         Short=Fumarase C;         EC=4.2.1.2;

Homologs  Archaea  37/68 : Bacteria  772/915 : Eukaryota  179/199 : Viruses  0/175   --->[See Alignment]
a.127.1
:470 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   6->424 1vdkA PDBj e-108 51.1 %
:RPS:PDB   5->461 3e04A PDBj e-110 42.8 %
:RPS:SCOP  6->459 1fuoA  a.127.1.1 * e-121 48.2 %
:HMM:SCOP  5->462 1j3uA_ a.127.1.1 * 5.5e-165 44.6 %
:RPS:PFM   19->341 PF00206 * Lyase_1 8e-54 45.8 %
:RPS:PFM   408->461 PF10415 * FumaraseC_C 4e-06 42.6 %
:HMM:PFM   13->342 PF00206 * Lyase_1 6.3e-108 52.6 310/312  
:HMM:PFM   408->461 PF10415 * FumaraseC_C 1.3e-25 59.3 54/55  
:BLT:SWISS 1->470 FUMC_HALSA 0.0 100.0 %
:PROS 317->326|PS00163|FUMARATE_LYASES
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAG19688.1 GT:GENE fumC GT:PRODUCT fumarate hydratase GT:DATABASE GIB00041CH01 GT:ORG halo0 GB:ACCESSION GIB00041CH01 GB:LOCATION complement(1011395..1012807) GB:FROM 1011395 GB:TO 1012807 GB:DIRECTION - GB:GENE fumC GB:PRODUCT fumarate hydratase GB:NOTE FumC GB:PROTEIN_ID AAG19688.1 GB:DB_XREF GI:10580868 GB:GENE:GENE fumC LENGTH 470 SQ:AASEQ MSEDYRTEQDSLGEMQVPADAYWGAQTQRAIENFPISGIAFGRRFVRALGVVKKAAAQANRDLGLVDDERADAIVAAADEVIAGEHDDQFPVDVFQTGSGTSSNMNANEVIANRAAELLGEEIGDRVVHPNDHVNYGQSSNDVIPTAMHVASLDALVNDVKPGLETLAAELDDKADAFDGVVKTGRTHLQDATPVRLGQEFGGYRTQVEKGIDRIEAVAPRLSELALGGTAVGTGLNTHPEFPETAAGYISEETGVTFREADNHFEAQAAHDAMNEAHGALRTVAGSLNKIANDLRLLASGPRNGLGEIEQPENQPGSSIMPGKINPVVAEAVNQVHKQVVGNDAAIAAGAAEGQIDLNLYKPVLAHNFLQSADMLANASAAFGEKFVAKLEANEAACEAQVERSMALATALNPTIGYDKASEVAKAALKEGKTVTEVVVEKGYLSEAEAADVLDPEGMTHRGILSGDDT GT:EXON 1|1-470:0| SW:ID FUMC_HALSA SW:DE RecName: Full=Fumarate hydratase class II; Short=Fumarase C; EC=4.2.1.2; SW:GN Name=fumC; OrderedLocusNames=VNG_1356G; SW:KW Complete proteome; Cytoplasm; Lyase; Tricarboxylic acid cycle. SW:EXACT T SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->470|FUMC_HALSA|0.0|100.0|470/470| GO:SWS:NREP 3 GO:SWS GO:0005737|"GO:cytoplasm"|Cytoplasm| GO:SWS GO:0016829|"GO:lyase activity"|Lyase| GO:SWS GO:0006099|"GO:tricarboxylic acid cycle"|Tricarboxylic acid cycle| PROS 317->326|PS00163|FUMARATE_LYASES|PDOC00147| SEG 66->83|vdderadaivaaadevia| SEG 225->236|lalggtavgtgl| SEG 345->352|aaiaagaa| SEG 430->443|kegktvtevvvekg| BL:PDB:NREP 1 BL:PDB:REP 6->424|1vdkA|e-108|51.1|419/458| RP:PDB:NREP 1 RP:PDB:REP 5->461|3e04A|e-110|42.8|451/456| RP:PFM:NREP 2 RP:PFM:REP 19->341|PF00206|8e-54|45.8|295/302|Lyase_1| RP:PFM:REP 408->461|PF10415|4e-06|42.6|54/55|FumaraseC_C| HM:PFM:NREP 2 HM:PFM:REP 13->342|PF00206|6.3e-108|52.6|310/312|Lyase_1| HM:PFM:REP 408->461|PF10415|1.3e-25|59.3|54/55|FumaraseC_C| GO:PFM:NREP 3 GO:PFM GO:0003824|"GO:catalytic activity"|PF00206|IPR000362| GO:PFM GO:0006099|"GO:tricarboxylic acid cycle"|PF10415|IPR018951| GO:PFM GO:0016829|"GO:lyase activity"|PF10415|IPR018951| RP:SCP:NREP 1 RP:SCP:REP 6->459|1fuoA|e-121|48.2|454/456|a.127.1.1| HM:SCP:REP 5->462|1j3uA_|5.5e-165|44.6|457/462|a.127.1.1|1/1|L-aspartase-like| OP:NHOMO 1514 OP:NHOMOORG 988 OP:PATTERN 11----1211111111-111----11111111--------1-1---11--11--1-1---1111--11 1111132222322211111-11111211111111111246111112212222323111--11121132111-11111111111-1---1111-211--1322111111111-1-11-11111111---111---1111111---11111111111111111111111111111111111111111111----22444444342344444223332443-12311111111121111111111111111111111113223-1112211221212111--11-----1--111111111111---11111---11111111-1-1--23------------22-----1-222---2222-1-22111111---221111211112123111112111122222222221-3323322221112221232214112111111311121121111111111111112111111111111111111111111111-11-111-111112222221111111121111112211212-2111-11122112222111-11212222222111122212-2123-333321111111122221212-42142122222221222222211--111222111111112222212----11---1222-21111------22222222222222222-2222422222222222222222332222222222222222222222222222222222222222211211111111111121322222222222222222222-2122213333444323333233211111111111113222222221111111111111111----332211--------1---------------------------11-112112211- ----211-----1122221111112121111111111111111111111112222211111111211112113121111112122111-12121111111111221-1112121-111112--111111171-11111111111-1111111111111221-12112512712331-12S222113--31311131113 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 464 STR:RPRED 98.7 SQ:SECSTR ccccEEEEEETTEEEEEETTccccHHHHHHHHHcccccGcccHHHHHHHHHHHHHHHHHGGGGTccHHHHHHHHHHHHHHHTHTccGGGccccccccTTcHHHHHHHHHHHHHHHHHHTTccTTccccccccccTTTccHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTTTcEEEEEETTEEEEEEEHHHHHHHHHHHHHHHHHHHHHTcTTTcEEcTTcTTTcccTTccTTHHHHHHHHHHHHHTcccEEcccHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHTcccccccccEEcEEccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHTccTTccccHHHHHHHHHHHHHHHHHHHHHHHHHTGGGcEEcHHHHHHHHHHccGGGGGGHHHHcHHHHHHHHHHHHHHTccHHHHHHHHTcccHHHHHHHccGGGccccHc###### DISOP:02AL 1-3, 465-470| PSIPRED ccccccccccccccEEccHHHHccHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHccccHHHHHHHHcccHHHcHHHHHHHHHHHHHHHHHHHcccccHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccEEEccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHccccccccccHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccEEEEEcccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHcccHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccEEcHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHcccccHHHHHHHHcHHHHccccccccccc //