Halobacterium sp. NRC-1 (halo0)
Gene : trpF
DDBJ :trpF phosphoribosylanthranilate isomerase
Swiss-Prot:TRPF_HALSA RecName: Full=N-(5'-phosphoribosyl)anthranilate isomerase; Short=PRAI; EC=5.3.1.24;
Homologs Archaea 19/68 : Bacteria 246/915 : Eukaryota 6/199 : Viruses 0/175 --->[See Alignment]
c.1.2
:218 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB 1->199 1nsjA PDBj 4e-22 37.8 %
:RPS:PDB 1->199 1dl3B PDBj 8e-10 31.5 %
:RPS:SCOP 4->199 1piiA1 c.1.2.4 * 4e-08 27.6 %
:HMM:SCOP 1->212 1nsjA_ c.1.2.4 * 1.4e-47 39.4 %
:RPS:PFM 35->198 PF00697 * PRAI 7e-19 43.6 %
:HMM:PFM 4->207 PF00697 * PRAI 2.2e-41 40.8 191/197
:BLT:SWISS 1->218 TRPF_HALSA 2e-94 100.0 %
:SEG
SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAG19903.1
GT:GENE trpF
GT:PRODUCT phosphoribosylanthranilate isomerase
GT:DATABASE GIB00041CH01
GT:ORG halo0
GB:ACCESSION GIB00041CH01
GB:LOCATION complement(1227011..1227667)
GB:FROM 1227011
GB:TO 1227667
GB:DIRECTION -
GB:GENE trpF
GB:PRODUCT phosphoribosylanthranilate isomerase
GB:NOTE TrpF
GB:PROTEIN_ID AAG19903.1
GB:DB_XREF GI:10581119
GB:GENE:GENE trpF
LENGTH 218
SQ:AASEQ MTRVKVCGLTTERDHAAAVAAGADAVGIIADVPVETPREVSVETATALRAATPPFVTSVLVTMPATPEHAVDLVRTVAPDAVQLHGDLPVGDAAYVAANTPCPVIKAVTAGDQSAARYADVVDALLVDSPPTDDAGAGGGTGRTHDWAATRAFADRVDTPVVLAGGLTPANVADAVDTVDPFAVDVASGVEARPGEKDHAAVSAFVARATATPDPTLT
GT:EXON 1|1-218:0|
SW:ID TRPF_HALSA
SW:DE RecName: Full=N-(5'-phosphoribosyl)anthranilate isomerase; Short=PRAI; EC=5.3.1.24;
SW:GN Name=trpF; OrderedLocusNames=VNG_1648G;
SW:KW Amino-acid biosynthesis; Aromatic amino acid biosynthesis;Complete proteome; Isomerase; Tryptophan biosynthesis.
SW:EXACT T
SW:FUNC +
BL:SWS:NREP 1
BL:SWS:REP 1->218|TRPF_HALSA|2e-94|100.0|218/218|
GO:SWS:NREP 4
GO:SWS GO:0008652|"GO:cellular amino acid biosynthetic process"|Amino-acid biosynthesis|
GO:SWS GO:0009073|"GO:aromatic amino acid family biosynthetic process"|Aromatic amino acid biosynthesis|
GO:SWS GO:0016853|"GO:isomerase activity"|Isomerase|
GO:SWS GO:0000162|"GO:tryptophan biosynthetic process"|Tryptophan biosynthesis|
SEG 16->31|aaavaagadavgiiad|
SEG 130->142|pptddagagggtg|
SEG 200->212|aavsafvaratat|
BL:PDB:NREP 1
BL:PDB:REP 1->199|1nsjA|4e-22|37.8|188/205|
RP:PDB:NREP 1
RP:PDB:REP 1->199|1dl3B|8e-10|31.5|181/194|
RP:PFM:NREP 1
RP:PFM:REP 35->198|PF00697|7e-19|43.6|156/199|PRAI|
HM:PFM:NREP 1
HM:PFM:REP 4->207|PF00697|2.2e-41|40.8|191/197|PRAI|
GO:PFM:NREP 2
GO:PFM GO:0004640|"GO:phosphoribosylanthranilate isomerase activity"|PF00697|IPR001240|
GO:PFM GO:0006568|"GO:tryptophan metabolic process"|PF00697|IPR001240|
RP:SCP:NREP 1
RP:SCP:REP 4->199|1piiA1|4e-08|27.6|181/198|c.1.2.4|
HM:SCP:REP 1->212|1nsjA_|1.4e-47|39.4|203/0|c.1.2.4|1/1|Ribulose-phoshate binding barrel|
OP:NHOMO 279
OP:NHOMOORG 271
OP:PATTERN ------------------------11111111---11------1-12-111121-------------- 1111-1--------------------------------11--------1-----1---------1-----------------1-------------------------1------------------------1--1--1-----12111--11-11------1-11111-----------------------------1----------------------11-1----1---------------------------------------1---------------11111111111111-------------1------------1---------------------------11--21----1111------1-1--1--------1111--111111111111111-11-11-1-111-111-111---1111-1-1111111111------------1111------------------------------1111------111111111111111-111--1111--1--1111--11-1----11111111-11111111--1----1-1-11---111-111-1111111111-3--------------------------111-1-11---------------------------1111--------------------------------------------------------------------------------------------------1111-1111---------------------111-1111111111111111111---------1---1----------11-1-11---111111----------------------------------------------1--1-1111-- ---------------------------------------------------------------------------------------------------------1---------------------------------------------------------1---------1------------------111---- -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
STR:NPRED 198
STR:RPRED 90.8
SQ:SECSTR ccEEEEcccccHHHHHHHHHHHHTccEEEEEccTTcTTcccHHHHHHHHTTcccEEEEEEEEccccHHHHHHHHHHHTccEEEEcccccHHHHHHHHTTcEEEEEEEcccHHHHHHHHTTTTccEEEEcccccccccccGG#cccccGGGTGGGGGGccccEEcccccTTTHHHHHHHHcccEEEEcGGGEEETTEEcH###################
DISOP:02AL 214-218|
PSIPRED cEEEEEcccccHHHHHHHHHHcccEEEEEEEEcccccccccHHHHHHHHHHcccccEEEEEEEcccHHHHHHHHHHccccEEEEEccccHHHHHHHHHHccccEEEEEEcccHHHHHHHccccEEEEEccccccccccccccccccHHHHHHHHHHccccEEEEccccHHHHHHHHHHHccEEEEccccEEcccccccHHHHHHHHHHHHHccccccc
//
[GTOP]
