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Lactobacillus salivarius UCC118 (lsal0)
Gene : ABD98845.1
DDBJ      :             Hypothetical membrane spanning protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  40/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
:448 amino acids
:PSIPRED
:DISOPRED
:RPS:PFM   51->200 PF06738 * DUF1212 1e-12 28.8 %
:HMM:PFM   50->249 PF06738 * DUF1212 5.3e-49 29.2 192/193  
:HMM:PFM   314->397 PF06738 * DUF1212 5.6e-06 32.1 84/193  
:BLT:SWISS 51->292 YJJP_SHIFL 8e-06 23.9 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABD98845.1 GT:GENE ABD98845.1 GT:PRODUCT Hypothetical membrane spanning protein GT:DATABASE GIB00337CH01 GT:ORG lsal0 GB:ACCESSION GIB00337CH01 GB:LOCATION 26461..27807 GB:FROM 26461 GB:TO 27807 GB:DIRECTION + GB:PRODUCT Hypothetical membrane spanning protein GB:NOTE COG0011 [S] Uncharacterized conserved protein GB:PROTEIN_ID ABD98845.1 GB:DB_XREF GI:90820206 LENGTH 448 SQ:AASEQ MSGEEANSMLQSVMKHHHMQMPWHNFTPDNSNTPAKRATLKEKATLVGRVGIMLLSYGTGAWRVRDSMNAIARELNISCSADVGLVSIEYTCVDEEGHGYTQALSLASTGVNTDKLSEMEQFVMDFNKGGSDLSSEQIHEILDEIERKPGHYTAIIAGLAAASACCAFVFLLGGGLVEMLCSFVGAGFGNYIRRKMIERRITLLACVSVSVAVACIFYLIAFKSLVAIMHVSLQHEAGYIGAMLFVIPGFPFITSGLDIAKLDMRSGLERMMYAIMIITVATLVGWVVAMAVHLKPVNFIPLDLGVIPMMLLRIPASFVGVFGFSIMFNSTIEMATWAGIIGAIANTLRLELVDLTNIPAGAAAFTAALVAGLLASLIKGYPRISLTVPSIVIMVPGLYMYRAVYNIGVASINVGATWLTEAALIVMFLPLGLITARILTDKKWRYKD GT:EXON 1|1-448:0| BL:SWS:NREP 1 BL:SWS:REP 51->292|YJJP_SHIFL|8e-06|23.9|226/256| TM:NTM 9 TM:REGION 160->182| TM:REGION 204->226| TM:REGION 240->262| TM:REGION 271->293| TM:REGION 297->319| TM:REGION 324->346| TM:REGION 358->380| TM:REGION 383->405| TM:REGION 419->441| SEG 154->167|aiiaglaaasacca| SEG 205->215|acvsvsvavac| SEG 360->375|agaaaftaalvaglla| RP:PFM:NREP 1 RP:PFM:REP 51->200|PF06738|1e-12|28.8|146/192|DUF1212| HM:PFM:NREP 2 HM:PFM:REP 50->249|PF06738|5.3e-49|29.2|192/193|DUF1212| HM:PFM:REP 314->397|PF06738|5.6e-06|32.1|84/193|DUF1212| OP:NHOMO 40 OP:NHOMOORG 40 OP:PATTERN -------------------------------------------------------------------- -----11-----1-----------------------------------1--------------1-------1111111--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1111111111111111-1-111----------------------------------------------------------------------------11------------------------------------------------------------------------------1-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------11----------------------------------------11-----------1------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 1-15,448-449| PSIPRED cccHHHHHHHHHHHHHHcEEccHHHHccccccccccHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHccEEEEEEEEEEEEEEEEEccccEEEEEEEcccccccHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHcccHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHccHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccc //