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Lactobacillus salivarius UCC118 (lsal0)
Gene : ABD98848.1
DDBJ      :             Oligoendopeptidase F
Swiss-Prot:             

Homologs  Archaea  13/68 : Bacteria  355/915 : Eukaryota  7/199 : Viruses  0/175   --->[See Alignment]
d.92.1
:600 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   6->594 3ce2A PDBj 2e-50 24.4 %
:RPS:PDB   3->594 3ce2A PDBj 5e-84 23.5 %
:RPS:SCOP  57->589 1j36A  d.92.1.5 * 2e-27 13.5 %
:HMM:SCOP  3->583 1i1iP_ d.92.1.5 * 1.4e-88 25.6 %
:RPS:PFM   122->169 PF08439 * Peptidase_M3_N 5e-04 41.7 %
:RPS:PFM   202->577 PF01432 * Peptidase_M3 8e-18 27.8 %
:HMM:PFM   200->581 PF01432 * Peptidase_M3 6.3e-33 25.7 378/458  
:HMM:PFM   131->176 PF08439 * Peptidase_M3_N 1.5e-10 34.8 46/70  
:BLT:SWISS 3->577 PEPF_BACSU 1e-67 27.8 %
:PROS 383->392|PS00142|ZINC_PROTEASE

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABD98848.1 GT:GENE ABD98848.1 GT:PRODUCT Oligoendopeptidase F GT:DATABASE GIB00337CH01 GT:ORG lsal0 GB:ACCESSION GIB00337CH01 GB:LOCATION complement(29664..31466) GB:FROM 29664 GB:TO 31466 GB:DIRECTION - GB:PRODUCT Oligoendopeptidase F GB:NOTE COG1164 [E] Oligoendopeptidase F GB:PROTEIN_ID ABD98848.1 GB:DB_XREF GI:90820209 LENGTH 600 SQ:AASEQ MALPKRSEVSVNETWDLTAIYPDKKAWKADMVAVRELVTQFQNNYRSKLTEAKIIIAALHDLETIYQKLSWIEHYAFLPQTTDMTNPEYNQMLVENDNLQATITADLSFFKTEVLTNPVSLLDQVAEIEPQFAPVVRHWKVEKPHQLSPEVEKTLATLSPTLNSSERIYTTARAADWDMEDFEVDGKTYPMSFVLYENTYQYHPNPEVRHKAHQIFSDTLRKHKNTVAANYYTQVSKEKKLADLRGYDSVFDYLLSDQEVSRETFDRQIDVIIDELGPVMQKYVKLLQKERGLDKMLYSDLQIDLDPEFAPKADLESATGYISEAVSVLGEDYKNAILKAFPERWVDFPANAGKESGGFETTPYGLHPYILMSWTGILPDVYTLIHELGHAGNFIKINENNSILTSEPSLYLIESPSTFNELLLTHSLEQKSDDPRMKRFAYTTMLTNTYFHNFITHLLEAAFQREVYTLVENGQTFDGDKLTQIKMDVQKRFWGDAVDIDENAGLTWMRQSHYYMGLYSYTYSAGLTIATQAYLKVLEEGQPAVDRWLEYISLGDQKAPMDAAKVAGVDVTTAEPLHNTIKFLNDTVDKVIALTEELNR GT:EXON 1|1-600:0| BL:SWS:NREP 1 BL:SWS:REP 3->577|PEPF_BACSU|1e-67|27.8|571/670| PROS 383->392|PS00142|ZINC_PROTEASE|PDOC00129| BL:PDB:NREP 1 BL:PDB:REP 6->594|3ce2A|2e-50|24.4|581/595| RP:PDB:NREP 1 RP:PDB:REP 3->594|3ce2A|5e-84|23.5|587/595| RP:PFM:NREP 2 RP:PFM:REP 122->169|PF08439|5e-04|41.7|48/69|Peptidase_M3_N| RP:PFM:REP 202->577|PF01432|8e-18|27.8|370/410|Peptidase_M3| HM:PFM:NREP 2 HM:PFM:REP 200->581|PF01432|6.3e-33|25.7|378/458|Peptidase_M3| HM:PFM:REP 131->176|PF08439|1.5e-10|34.8|46/70|Peptidase_M3_N| GO:PFM:NREP 4 GO:PFM GO:0008237|"GO:metallopeptidase activity"|PF08439|IPR013647| GO:PFM GO:0008270|"GO:zinc ion binding"|PF08439|IPR013647| GO:PFM GO:0004222|"GO:metalloendopeptidase activity"|PF01432|IPR001567| GO:PFM GO:0006508|"GO:proteolysis"|PF01432|IPR001567| RP:SCP:NREP 1 RP:SCP:REP 57->589|1j36A|2e-27|13.5|511/598|d.92.1.5| HM:SCP:REP 3->583|1i1iP_|1.4e-88|25.6|562/0|d.92.1.5|1/1|Metalloproteases ("zincins"), catalytic domain| OP:NHOMO 582 OP:NHOMOORG 375 OP:PATTERN ------------------------11121111------------------111-------------11 ------------------------------------------------------------------------------1-----------------------------1-111111111111111-----------22222---51-------------------------------------21222---312434344442444444323321444222231122222252322222222222222222222121221111122--2222122312122222122112222222222222222222222222221112222-23-2-------2-212--1111211224111-1111-111--223-111--1-111-----111111111111111111111111-11111111111111111111111111---11111111111111111111111121----------------------------------------------------------------------------------------------------------1---1----------1111111-11111---1-1111111111111111111-11--11------------------------------------------------------------------------------------------------------------------------------------------------------------------------1-------------------------------1------11111----------------11------111111112-4------11111-11111111112222111-1---111- -------------------------------------------------------------------------------------------------------------------------------2-----------------------------------------------1--1F1-1--1------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 596 STR:RPRED 99.3 SQ:SECSTR ##cccGGGccGGGccccTTTcccHHHHHHHHHHTccccccccTTcGGGcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcTTcHHHHHHHHHHHHHHHHHHHHTTTHHHHHHTccHHHHHHHccTTGGGHHHHHHHHTTGGGcccHHHHHHHHHHTTGGGHHHHHHHHHHHTTccccEEEccccEEEccHHHHHHHHHTcccHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTTcccHHHHHHTTTTccHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHTcccccGGGTTcccccccTccccHHHHHHHHHHHTGGGHHHHHHHHHHHHHTccEEccccTTcccccEEEccTTcccEEEccccccHHHHHHHHHHHHHHHHHHHHHHHccGGGccccGGGTTHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTTccccHHHHHHHHHHHHHHHHTTTccccTTGGGGGGGccGGGccccTHHHHHHHHHHHHHHHHHHTTcTTHHHHHHHHHTTTTcccHHHHHHHTTccTTccHHHHHHHHHHHHHHHHHHTTcccc## DISOP:02AL 1-3,600-601| PSIPRED cccccHHHccHHHccccHHHcccHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHcccHHHHHHHHHHHccccccHHHHHHHHHHHHHHccHHHHHHHHHHHHccccccccccEEEEccHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHccccccccccccHHHHHHHHHHHHHHccHHHHHHHHHHHHcccEEccccccccccccccccccccEEEEEEccccHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHcccccccccccccHHHccccccccccHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHccccccHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHcc //