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Lactobacillus salivarius UCC118 (lsal0)
Gene : ABD98854.1
DDBJ      :             Transcriptional regulator, MarR family
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  8/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
a.4.5
:149 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   6->105 3g3zA PDBj 6e-08 29.2 %
:RPS:PDB   24->106 2d1hB PDBj 4e-10 12.0 %
:RPS:SCOP  7->106 1hsjA1  a.4.5.28 * 3e-09 16.0 %
:HMM:SCOP  5->141 1jgsA_ a.4.5.28 * 8.5e-20 25.0 %
:HMM:PFM   31->94 PF01978 * TrmB 5e-09 24.6 61/68  
:BLT:SWISS 30->112 YKOM_BACSU 1e-06 40.0 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABD98854.1 GT:GENE ABD98854.1 GT:PRODUCT Transcriptional regulator, MarR family GT:DATABASE GIB00337CH01 GT:ORG lsal0 GB:ACCESSION GIB00337CH01 GB:LOCATION 38074..38523 GB:FROM 38074 GB:TO 38523 GB:DIRECTION + GB:PRODUCT Transcriptional regulator, MarR family GB:NOTE COG0583 [K] Transcriptional regulator GB:PROTEIN_ID ABD98854.1 GB:DB_XREF GI:90820215 LENGTH 149 SQ:AASEQ MSITKDEVQTLTSRLDLLIAKGAREYKDWNQKHGLTDYRSVILYELLLHTRLTQKQIVERTNLPKQSINKGILQLRDEGYLTLEQDEKDNRVKYCFLTEEGEEYARVKIQPLLDIEEKIIMKMGKKKIEQLNELLEEWNLNFKKYKDEE GT:EXON 1|1-149:0| BL:SWS:NREP 1 BL:SWS:REP 30->112|YKOM_BACSU|1e-06|40.0|80/154| SEG 115->141|ieekiimkmgkkkieqlnelleewnln| BL:PDB:NREP 1 BL:PDB:REP 6->105|3g3zA|6e-08|29.2|96/140| RP:PDB:NREP 1 RP:PDB:REP 24->106|2d1hB|4e-10|12.0|83/96| HM:PFM:NREP 1 HM:PFM:REP 31->94|PF01978|5e-09|24.6|61/68|TrmB| RP:SCP:NREP 1 RP:SCP:REP 7->106|1hsjA1|3e-09|16.0|100/115|a.4.5.28| HM:SCP:REP 5->141|1jgsA_|8.5e-20|25.0|136/0|a.4.5.28|1/1|"Winged helix" DNA-binding domain| OP:NHOMO 8 OP:NHOMOORG 8 OP:PATTERN -------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1----1-111-------1-----------------------------------------------------------------------------1------1------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 109 STR:RPRED 73.2 SQ:SECSTR #####HHHHHHHHHHHHHHHHHHTTHHHHHHHHTccHHHHHHHHHHHHTccccHHHHHHHHTccHHHHHHHHHHHHHTTcEEEEEcccEEEEEcTTHHHHHHHHHHTHHHHHHH################################### DISOP:02AL 1-4,6-7,144-144,146-150| PSIPRED ccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHcccccHHHHHHHHcccHHHHHHHHHHHHHcccEEEcccccccEEEEEEEcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHcccc //