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Lactobacillus salivarius UCC118 (lsal0)
Gene : ABD98858.1
DDBJ      :             Two-component response regulator
Swiss-Prot:             

Homologs  Archaea  31/68 : Bacteria  863/915 : Eukaryota  85/199 : Viruses  0/175   --->[See Alignment]
a.4.6c.23.1
:236 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   2->119 2zwmA PDBj 1e-50 77.1 %
:BLT:PDB   134->234 2hwvA PDBj 6e-42 86.1 %
:RPS:PDB   2->118 2a9oA PDBj 2e-23 74.4 %
:RPS:PDB   133->234 2d1vA PDBj 2e-25 69.6 %
:RPS:SCOP  3->118 1a0oA  c.23.1.1 * 2e-31 31.0 %
:RPS:SCOP  134->231 1oddA  a.4.6.1 * 5e-22 20.4 %
:HMM:SCOP  1->196 1s8nA_ c.23.1.1 * 1.3e-42 33.7 %
:RPS:PFM   4->113 PF00072 * Response_reg 9e-23 51.8 %
:RPS:PFM   154->230 PF00486 * Trans_reg_C 6e-09 39.0 %
:HMM:PFM   4->113 PF00072 * Response_reg 5.5e-33 49.1 110/112  
:HMM:PFM   154->230 PF00486 * Trans_reg_C 2.6e-29 49.4 77/77  
:HMM:PFM   106->159 PF04456 * DUF503 0.00094 18.5 54/90  
:BLT:SWISS 2->234 YYCF_BACSU 3e-94 76.6 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABD98858.1 GT:GENE ABD98858.1 GT:PRODUCT Two-component response regulator GT:DATABASE GIB00337CH01 GT:ORG lsal0 GB:ACCESSION GIB00337CH01 GB:LOCATION 43139..43849 GB:FROM 43139 GB:TO 43849 GB:DIRECTION + GB:PRODUCT Two-component response regulator GB:NOTE COG0745 [TK] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain GB:PROTEIN_ID ABD98858.1 GB:DB_XREF GI:90820219 LENGTH 236 SQ:AASEQ MKKILVVDDEKPISDIVKFNLTKEGYDVYTAYDGEEALQQVKEVEPDLILLDLMLPKIDGLEVAREVRKTHDMPIIMVTAKDSEIDKVLGLELGADDYVTKPFSNRELVARVKANLRRQSAVAAKSSAEDDKNSEITVGDLTIHPEAYTVSKNGQRIELTHREFELLHYLAQHLGQVMTREHLLQTVWGYDYFGDVRTVDVTVRRLREKIEDNPSRPTWLVTRRGVGYYLRNPEVE GT:EXON 1|1-236:0| BL:SWS:NREP 1 BL:SWS:REP 2->234|YYCF_BACSU|3e-94|76.6|231/235| SEG 195->207|dvrtvdvtvrrlr| BL:PDB:NREP 2 BL:PDB:REP 2->119|2zwmA|1e-50|77.1|118/120| BL:PDB:REP 134->234|2hwvA|6e-42|86.1|101/101| RP:PDB:NREP 2 RP:PDB:REP 2->118|2a9oA|2e-23|74.4|117/117| RP:PDB:REP 133->234|2d1vA|2e-25|69.6|102/103| RP:PFM:NREP 2 RP:PFM:REP 4->113|PF00072|9e-23|51.8|110/111|Response_reg| RP:PFM:REP 154->230|PF00486|6e-09|39.0|77/77|Trans_reg_C| HM:PFM:NREP 3 HM:PFM:REP 4->113|PF00072|5.5e-33|49.1|110/112|Response_reg| HM:PFM:REP 154->230|PF00486|2.6e-29|49.4|77/77|Trans_reg_C| HM:PFM:REP 106->159|PF04456|0.00094|18.5|54/90|DUF503| GO:PFM:NREP 7 GO:PFM GO:0000156|"GO:two-component response regulator activity"|PF00072|IPR001789| GO:PFM GO:0000160|"GO:two-component signal transduction system (phosphorelay)"|PF00072|IPR001789| GO:PFM GO:0006355|"GO:regulation of transcription, DNA-dependent"|PF00072|IPR001789| GO:PFM GO:0000156|"GO:two-component response regulator activity"|PF00486|IPR001867| GO:PFM GO:0000160|"GO:two-component signal transduction system (phosphorelay)"|PF00486|IPR001867| GO:PFM GO:0003677|"GO:DNA binding"|PF00486|IPR001867| GO:PFM GO:0006355|"GO:regulation of transcription, DNA-dependent"|PF00486|IPR001867| RP:SCP:NREP 2 RP:SCP:REP 3->118|1a0oA|2e-31|31.0|116/128|c.23.1.1| RP:SCP:REP 134->231|1oddA|5e-22|20.4|98/100|a.4.6.1| HM:SCP:REP 1->196|1s8nA_|1.3e-42|33.7|187/190|c.23.1.1|1/1|CheY-like| OP:NHOMO 17283 OP:NHOMOORG 979 OP:PATTERN -----------------------93334-725--83-133333UH-6h2HD8D-2-2122-------3 Fdb8b566778655DEECC-CK55EFCCCCCBJHJIDIJHFLFJIB899CBAEHI67822KKQ7U9MYTYC444465558KDA26ABAOOmb-N22---D7S9GFoHhEZ1------1--11112433A866C5H7jnnmlNCHy9*o**qoGSRJL968BB9YfQK***T684665675655FFAAA585EDQccdcdZceLfaedbYMVKIHKcglFGJfBHICAABACwzABBABAA9AABBBAA89A96D675CC655466677CC655675686DED8668C99999999A99995555566667665B986648788EjPQxVVVbaZbVXQMiZZCHJEZOT8BJLOM9qicOJEC9DBC8HE44BXWSTPPL88888OKdbeKGLSUPQUEEDEDEEEDCG-SSeTUYTgHPI2YRRTUORYZTPNLOIIIJDLNJNMJJEFFFFFFFFFGFBBlQL333444442233443334444443422224AJNAAHJGFJZacbgXcLLKHUUhlNLNNEOfagUgWg23QWTjIWKIjRTXWBNZVLOJOVC2322212EB9Nd*O**cIH*YE*uUTc6*x*vrp*VVeerh**SdUBCA6888888555655555NYEGPCCWQDZXYaBVQKXLRSPNSQVSSNVRRVPdc--8CGGI------KJIIIKGMMMNMMNOLM-MONLMMLLMNMMMMMLMMJNMNHIDBCLKLMLMLLKMLLLLMLKKJIKKLMA1IKKKLLLKKLLL--4I676669A99GL*Gf444433244443116GFDEG9FADDOSmimlgppuajnnlYfdi321213212FNRRZNNNNNSUYbcUWROTOPNOOAA9A--*6PQFGHH33323323622-------------------------7D7AA887876e4 ----37--------9211212211-1211-----1---------11-11123141121-222--21-1-1-1111-----1111112-----113-2321322148-32-------------------------------------------------5----3-1-------7-248161122-A12E2-441C---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 234 STR:RPRED 99.2 SQ:SECSTR cEEEEEEcccHHHHHHHHHHHHTcTTEEEEEccHHHHHHHHHHHcccEEEEccEETTEEHHHHHHHHHHHcTcEEEEGGGcccHHHHHHHHHHTcccHHHHHHHHHHHHHHHHHHHHHGGGcHHHHHHHcHHHHHHHHHHHHTTHHHHHHHHccTTTTccHHHHHHHHHHTTTccccEEEEEccHHHHHHHHTccHHHHHHHHHHHHHHTTcHccccHHHHHHHHHTcEEcccc## DISOP:02AL 121-133,233-237| PSIPRED ccEEEEEEccHHHHHHHHHHHHHcccEEEEEccHHHHHHHHHHccccEEEEEcccccccHHHHHHHHHHcccccEEEEEEcccHHHHHHHHHcccccEEcccccHHHHHHHHHHHHHHccccccccccccccccEEEEccEEEEcccEEEEEccEEEEccHHHHHHHHHHHHcccccccHHHHHHHHccccccccEEEEEHHHHHHHHHcccccccccEEEEEcccEEEEcccccc //