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Lactobacillus salivarius UCC118 (lsal0)
Gene : ABD98867.1
DDBJ      :             Short chain dehydrogenase
Swiss-Prot:             

Homologs  Archaea  53/68 : Bacteria  874/915 : Eukaryota  195/199 : Viruses  0/175   --->[See Alignment]
c.2.1
:282 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   4->191 2uvdA PDBj 2e-23 33.0 %
:RPS:PDB   5->260 1a27A PDBj 3e-44 26.4 %
:RPS:SCOP  5->260 1a27A  c.2.1.2 * 3e-44 26.4 %
:HMM:SCOP  1->238 1zemA1 c.2.1.2 * 2.2e-62 35.3 %
:RPS:PFM   5->169 PF00106 * adh_short 2e-25 42.1 %
:HMM:PFM   5->170 PF00106 * adh_short 8.6e-34 23.5 162/167  
:BLT:SWISS 2->277 YQ53_SCHPO 3e-30 30.0 %
:PROS 139->167|PS00061|ADH_SHORT

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABD98867.1 GT:GENE ABD98867.1 GT:PRODUCT Short chain dehydrogenase GT:DATABASE GIB00337CH01 GT:ORG lsal0 GB:ACCESSION GIB00337CH01 GB:LOCATION 52659..53507 GB:FROM 52659 GB:TO 53507 GB:DIRECTION + GB:PRODUCT Short chain dehydrogenase GB:NOTE COG1028 [IQR] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) GB:PROTEIN_ID ABD98867.1 GB:DB_XREF GI:90820228 LENGTH 282 SQ:AASEQ MTKEVVIVTGASKGIGFETVLAALNNDMIVVGTSRTPEKLAAKVQEKLPAKVDNFTAMKMDFNEESIKQVVSEVIAKFGRIDVLVNNAGYAILGAFEDMDMAEVRTNFDVNVFGLMSMTQAVLPQMRKQKSGRIINLSSISGSVTGPSQSIYSASKAAVTLMSEALAQEVAPYNIKVTALCPWGVRTDFLDESSLKKPATQGGDYKVVDQTLAGLARLNHNQNGDPALVAQAIMKVVDMPNPPARLYLGAGALMAVQSKIEEIVQVANENLELSQSIDNPAN GT:EXON 1|1-282:0| BL:SWS:NREP 1 BL:SWS:REP 2->277|YQ53_SCHPO|3e-30|30.0|263/292| PROS 139->167|PS00061|ADH_SHORT|PDOC00060| BL:PDB:NREP 1 BL:PDB:REP 4->191|2uvdA|2e-23|33.0|188/246| RP:PDB:NREP 1 RP:PDB:REP 5->260|1a27A|3e-44|26.4|254/285| RP:PFM:NREP 1 RP:PFM:REP 5->169|PF00106|2e-25|42.1|164/169|adh_short| HM:PFM:NREP 1 HM:PFM:REP 5->170|PF00106|8.6e-34|23.5|162/167|adh_short| GO:PFM:NREP 2 GO:PFM GO:0008152|"GO:metabolic process"|PF00106|IPR002198| GO:PFM GO:0016491|"GO:oxidoreductase activity"|PF00106|IPR002198| RP:SCP:NREP 1 RP:SCP:REP 5->260|1a27A|3e-44|26.4|254/285|c.2.1.2| HM:SCP:REP 1->238|1zemA1|2.2e-62|35.3|235/0|c.2.1.2|1/1|NAD(P)-binding Rossmann-fold domains| OP:NHOMO 16842 OP:NHOMOORG 1122 OP:PATTERN 111122489797877426242211C4486A5A-2---------11154--722-34112-42642-45 HJY3i316669786n*pUU-Uy55h*UTUUUb****X***5Z9xNCD63DA2IGJB4C11LJM5MFSbYIA22222222296P123236578-5231--C7c7GE*Dc6J1111111111111147759E754AA8KIIGH222GAMDKK8786633432855364EOJe9355333344444GAA77771F9LHHIHIKJLGJLJLMJKGNNEQJIKAGGKJHC9887A7Kl766555536666665DAAAA82B29B26232CG558868759C9AA767676746655555555555575577777777744433244485357E5555455658A69938A7832117842197122225333336455D2GhHHN22222SC*dh569SIPNLIJKIHHJHKJV-MMOLJfLVSwZ2*kkQsej**wvoSYFNAILRMFHKGDK99999999JLMB7ACA--21111111121133-111121-21111ADmpEAGTNHYskontpPOOPMbbwsTQSSAN*V*W*pd48RROFBKFFRKZKmY8G9477DA8223222234BKE59S6E41121-433326883C3295ACCBNZ34432423322322433333334242454BCAEEHDBME97A98B4FCB997B8A998E1-3455811-111CHHM7K8CEECCCCCBC-EBDDDBCBDCEBDBBCCBDQTPJB8ABB89AABBAABA9A9ABTAB9A98B318CCCCCCBCCCB111757545HHGH4GKMK222938211113352OPNTQBH6EAKATUOSLQcdOONWPKRPO7565575553677I98998FEA9BEFJKJKI99975652254HHA9CC--------2-3----2-1-3-1------31------54332656754E4 1212hbH-C6318DIbknZsbgd*qxvKJCJGGJNJJTMPLNQHEChYj*lz**NXVSOKGNBAGAA86A65JCI554768BBCDEAD-c*NkLrLBCACB7ETOJ-HMJ*l*WXdSD7F8IWCia9XCm*X-YOcGFGBXELZOCJF89Q46NHWTfmxyaL*adMaRdtOelf8EC7o432AUOLS*dhOCGZIOOA ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 277 STR:RPRED 98.2 SQ:SECSTR cTcEEEEEcccccHHHHHHHHHHHTcTTccEEEEEEEccGGGTHHHHTTccTTcEEEEEccTcHHHHHHHHHTcHHTTccccEEEEcccccccccGGGccHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTcEEEEEEEEGGGTcccTTcHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEccccccTTTTccccHHHccHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHccccccEEEcccTTHHHHHTTTcHHTTcccTTccEEEEE##### DISOP:02AL 1-1,281-283| PSIPRED ccccEEEEEccccHHHHHHHHHHHHcccEEEEEEccHHHHHHHHHHHHHHccccEEEEEccccHHHHHHHHHHHHHHHccccEEEEcccccccccHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEEccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHccEEEEEEEcccccHHHHHHHHHHHHHccccHHHHHHHHHHHHHccccccccHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccc //