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Lactobacillus salivarius UCC118 (lsal0)
Gene : ABD98870.1
DDBJ      :             Transposase ISLasa1a, IS1223 family
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  63/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
a.4.1a.4.12
:172 amino acids
:PSIPRED
:DISOPRED
:RPS:SCOP  48->120 2oa4A1  a.4.12.3 * 8e-06 13.7 %
:HMM:SCOP  54->164 1pdnC_ a.4.1.5 * 7.4e-08 25.5 %
:RPS:PFM   58->133 PF01527 * Transposase_8 2e-04 26.3 %
:HMM:PFM   2->47 PF01527 * Transposase_8 8.4e-06 22.2 45/76  
:HMM:PFM   58->146 PF01527 * Transposase_8 7.5e-10 29.6 71/76  
:BLT:SWISS 1->113 YI3A_LACJO 8e-18 34.5 %
:REPEAT 2|3->53|60->110

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABD98870.1 GT:GENE ABD98870.1 GT:PRODUCT Transposase ISLasa1a, IS1223 family GT:DATABASE GIB00337CH01 GT:ORG lsal0 GB:ACCESSION GIB00337CH01 GB:LOCATION 56327..56845 GB:FROM 56327 GB:TO 56845 GB:DIRECTION + GB:PRODUCT Transposase ISLasa1a, IS1223 family GB:NOTE COG0675 [L] Transposase and inactivated derivatives GB:PROTEIN_ID ABD98870.1 GB:DB_XREF GI:90820231 LENGTH 172 SQ:AASEQ MTKYTQKFKLDLIQEYLDTGCSQRCLENKYSLPKDTLKKWWTVYNLKGPEGLKLRHFKRKFNVDFKLRVINYYLNNDVSMSKVAASHNLLCSQISIWLKLFMEGGSEALKPKKKGRPSKMSKMTKKDARKILKKESDEIAALKSELRQVKMERDILKKSLTLFGPSKTRRKQ GT:EXON 1|1-172:0| BL:SWS:NREP 1 BL:SWS:REP 1->113|YI3A_LACJO|8e-18|34.5|113/177| NREPEAT 1 REPEAT 2|3->53|60->110| RP:PFM:NREP 1 RP:PFM:REP 58->133|PF01527|2e-04|26.3|76/78|Transposase_8| HM:PFM:NREP 2 HM:PFM:REP 2->47|PF01527|8.4e-06|22.2|45/76|Transposase_8| HM:PFM:REP 58->146|PF01527|7.5e-10|29.6|71/76|Transposase_8| GO:PFM:NREP 3 GO:PFM GO:0003677|"GO:DNA binding"|PF01527|IPR002514| GO:PFM GO:0004803|"GO:transposase activity"|PF01527|IPR002514| GO:PFM GO:0006313|"GO:transposition, DNA-mediated"|PF01527|IPR002514| RP:SCP:NREP 1 RP:SCP:REP 48->120|2oa4A1|8e-06|13.7|73/93|a.4.12.3| HM:SCP:REP 54->164|1pdnC_|7.4e-08|25.5|110/0|a.4.1.5|2/2|Homeodomain-like| OP:NHOMO 241 OP:NHOMOORG 63 OP:PATTERN -------------------------------------------------------------------- -----------4---------------------------------------------------------------------1---------------------------------------------------------------------------------------------------------------------5-2---1333------1-----2--------2--1---4-----------------1----------114--2-----27------------------------------------------------1----------A--------------1-------------------------------------------------------------------------------1-----------------------------------------------------------------------2--E-5-----CC--------------1-2--3-----------2-------------------------------------------------------------------------------------------------------------------------------------2--6---------3------522-11-414-------------------------------378738881-3-------------------686-----1--1-----------64----------------1-5------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 1-1,107-141,162-173| PSIPRED cccccHHHHHHHHHHHHHccccHHHHHHHHcccHHHHHHHHHHHHHccHHHHHHccccccccHHHHHHHHHHHHHccccHHHHHHHHcccHHHHHHHHHHHHHccHHHHHccccccccccccccccccHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc //