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Lactobacillus salivarius UCC118 (lsal0)
Gene : ABD98894.1
DDBJ      :             Hypothetical membrane spanning protein
Swiss-Prot:             

Homologs  Archaea  3/68 : Bacteria  19/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
:597 amino acids
:PSIPRED
:DISOPRED
:RPS:PFM   28->405,472->526 PF09972 * DUF2207 3e-29 31.9 %
:HMM:PFM   27->526 PF09972 * DUF2207 1.9e-132 34.8 486/511  
:TM
:COIL
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABD98894.1 GT:GENE ABD98894.1 GT:PRODUCT Hypothetical membrane spanning protein GT:DATABASE GIB00337CH01 GT:ORG lsal0 GB:ACCESSION GIB00337CH01 GB:LOCATION 90664..92457 GB:FROM 90664 GB:TO 92457 GB:DIRECTION + GB:PRODUCT Hypothetical membrane spanning protein GB:NOTE COG0344 [S] Predicted membrane protein GB:PROTEIN_ID ABD98894.1 GB:DB_XREF GI:90820255 LENGTH 597 SQ:AASEQ MKRNIVLILCCIFLSLIGIKNIQADVNYDVKDYTVNVDVQKNGSLIIKRHIRYDFPDEAHGVYYRQNLESNQQISQTQVWINGQEAKQNDSAGNNTYKLTRDDKGYLFKVYHNVDNQEVNFTYQYVLNNAVINWKDTAELNFKVIGDGWETELNNIKVTIKLPGQDVSELQAWSHGPLTGTTKVDKKSGQVTLSLAELPAKNFVESHILFPVALTPENTNVRNEKHKAEAQKQEKQLALEANRKRKAQERKDRLWAGAMFVVICVGSFGSILYNLMPLKEKTYRPLSVKNAPHVFELPNYEAAVAQSLFRDTDPDNKALSAYLLELSVKRIIKIEPIPNKKKDYLLTLLDETALSNNEILKLLFNKIGDTKQVSMKQIKKYGKKKHEHMNVVNAYKAWQKSVRDEADKLGWVSDNAKSAMIRRAIISGILLLILIVGLIVTDNTAALWVMGVSLVLLVVSILYFIMKGSIYTKTGAAGMTELRGFYRMMDDIGRFNLKEVGDIVLWEGLLPYAVALGLSKKVSKALIDNFTSEELQNSNFIYYYPFIYHNGIANFSNDFNSSFTRGMGNYSSPSGGSGGFSGGSSGGFGGGSGGGAF GT:EXON 1|1-597:0| COIL:NAA 23 COIL:NSEG 1 COIL:REGION 227->249| TM:NTM 5 TM:REGION 4->26| TM:REGION 257->279| TM:REGION 424->446| TM:REGION 448->470| TM:REGION 498->519| SEG 224->241|ekhkaeaqkqekqlalea| SEG 329->342|kriikiepipnkkk| SEG 425->440|iisgilllilivgliv| SEG 447->462|lwvmgvslvllvvsil| SEG 571->595|sspsggsggfsggssggfgggsggg| RP:PFM:NREP 1 RP:PFM:REP 28->405,472->526|PF09972|3e-29|31.9|403/494|DUF2207| HM:PFM:NREP 1 HM:PFM:REP 27->526|PF09972|1.9e-132|34.8|486/511|DUF2207| OP:NHOMO 23 OP:NHOMOORG 22 OP:PATTERN --------------------------------1-----------------1-1--------------- ------------------------------------------------------------------------------1-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------111--1-11111----12111--------------------------------------------------1--------------11-----------------------------1--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 1-1,70-74,217-245,569-586,593-598| PSIPRED cHHHHHHHHHHHHHHHHcccccccccccEEEEEEEEEEEcccccEEEEEEEEEEEcccccEEEEEEEcccccccEEEEEEEcccccccccccccEEEEEEEccccEEEEEEccccccEEEEEEEEEEcccEEEEccEEEEEEEEEcccccccccEEEEEEEEccccccHHEEEEEccccccEEEEEEccEEEEEEEccccccEEEEEEEEcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHccccccccccccccccccccEEEcccccHHHHHHHHccccccHHHHHHHHHHHHHHHHEEEcccccccccEEEEEEcccccccHHHHHHHHHHcccccEEEEEEEHHHccccHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHEEccHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEHHHHHHHHHHHHHHHHHHHHHHHHccHHHHccccEEEEEcccccccccccccHHHHHHHHcccccccccccccccccccccccccccccccc //