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Lactobacillus salivarius UCC118 (lsal0)
Gene : ABD98908.1
DDBJ      :             PTS system, mannose-specific IIC component
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  189/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
:269 amino acids
:PSIPRED
:DISOPRED
:RPS:PFM   1->237 PF03609 * EII-Sor 4e-25 31.2 %
:HMM:PFM   1->237 PF03609 * EII-Sor 2.2e-82 44.4 234/237  
:BLT:SWISS 1->241 PTNC_SHIFL 9e-40 41.6 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABD98908.1 GT:GENE ABD98908.1 GT:PRODUCT PTS system, mannose-specific IIC component GT:DATABASE GIB00337CH01 GT:ORG lsal0 GB:ACCESSION GIB00337CH01 GB:LOCATION 106843..107652 GB:FROM 106843 GB:TO 107652 GB:DIRECTION + GB:PRODUCT PTS system, mannose-specific IIC component GB:NOTE COG3715 [G] Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC GB:PROTEIN_ID ABD98908.1 GB:DB_XREF GI:90820269 LENGTH 269 SQ:AASEQ MSTIQIILVVIVAFIVGCSSVNDQIETYQPVVACSLIGLVTGQLELGVMLGGSLQLITMGWANVGAAMAPDAALAGVASAIILIEGNQGAQGIGPAIALAVPLAVAGLGLTMIVRTATVFIAHIMDKRAEKTDINGIQAWHFIGMTLQGLRVAIPALLLMLIPVSLVRQGLEAMPEWLTAGMTIGGGMVVAVGYAMVINMMSSREVWPFFFLGFALAAIKQLTLISLGIIGVCLAILFLALEGSGGSSNGSSNGSGDSDDPLGDILEDI GT:EXON 1|1-269:0| BL:SWS:NREP 1 BL:SWS:REP 1->241|PTNC_SHIFL|9e-40|41.6|238/266| TM:NTM 6 TM:REGION 1->23| TM:REGION 45->67| TM:REGION 98->120| TM:REGION 144->166| TM:REGION 182->204| TM:REGION 215->237| SEG 66->78|aamapdaalagva| SEG 93->110|igpaialavplavaglgl| SEG 185->197|gggmvvavgyamv| SEG 243->260|gsggssngssngsgdsdd| RP:PFM:NREP 1 RP:PFM:REP 1->237|PF03609|4e-25|31.2|234/235|EII-Sor| HM:PFM:NREP 1 HM:PFM:REP 1->237|PF03609|2.2e-82|44.4|234/237|EII-Sor| GO:PFM:NREP 2 GO:PFM GO:0009401|"GO:phosphoenolpyruvate-dependent sugar phosphotransferase system"|PF03609|IPR004700| GO:PFM GO:0016021|"GO:integral to membrane"|PF03609|IPR004700| OP:NHOMO 264 OP:NHOMOORG 189 OP:PATTERN -------------------------------------------------------------------- ------------------------------------------------------------------------------2------------------------------------------------------------------------------------------------------------------------------------11-1-------1--333333----------------------4111341111111--3212211111111111111111111111111111111111111112221112221---17----1--212-3---221---1-2------------------1-2---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1----1--1------------111111-1222122211-21112221212221111122211111-1111111111111111122122221-211111111111111---------------2222121----1111------------------------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 243-260| PSIPRED ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHccccHHHHcHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHccccccccccccccccccccHHHHHHcc //