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Lactobacillus salivarius UCC118 (lsal0)
Gene : ABD98950.1
DDBJ      :             Succinyl-diaminopimelate desuccinylase
Swiss-Prot:             

Homologs  Archaea  46/68 : Bacteria  570/915 : Eukaryota  43/199 : Viruses  0/175   --->[See Alignment]
c.56.5d.17.1
:382 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   3->379 1vgyA PDBj 2e-21 30.3 %
:RPS:PDB   3->380 1cg2A PDBj 6e-41 21.9 %
:RPS:SCOP  3->250 1vgyA1  c.56.5.4 * 8e-31 25.9 %
:RPS:SCOP  242->293 1eqkA  d.17.1.2 * 4e-04 30.8 %
:RPS:SCOP  317->381 1vgyA1  c.56.5.4 * 6e-07 30.8 %
:HMM:SCOP  3->382 1lfwA1 c.56.5.4 * 3.3e-59 34.3 %
:RPS:PFM   66->378 PF01546 * Peptidase_M20 2e-18 31.6 %
:HMM:PFM   66->378 PF01546 * Peptidase_M20 1.6e-36 33.7 166/171  
:BLT:SWISS 3->382 DAPE_STAAW 1e-69 37.3 %
:PROS 64->73|PS00758|ARGE_DAPE_CPG2_1
:PROS 100->138|PS00759|ARGE_DAPE_CPG2_2
:PROS 171->183|PS01121|CASPASE_HIS
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABD98950.1 GT:GENE ABD98950.1 GT:PRODUCT Succinyl-diaminopimelate desuccinylase GT:DATABASE GIB00337CH01 GT:ORG lsal0 GB:ACCESSION GIB00337CH01 GB:LOCATION 150425..151573 GB:FROM 150425 GB:TO 151573 GB:DIRECTION + GB:PRODUCT Succinyl-diaminopimelate desuccinylase GB:NOTE COG0624 [E] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases GB:PROTEIN_ID ABD98950.1 GB:DB_XREF GI:90820311 LENGTH 382 SQ:AASEQ MEEKEKIKILQDLIQINSVNGNELEVAEYLHKLFAKSNLESKVDEFGDRRANLVLDVGQGEKVLGLTGHMDTVALGNEDKWSYPPLEAKIDGDRLYGRGAADMKSGLAALAIAIIELSDLGKIPGHIRFIATAGEEYGTPGANRLRDLGVAKDLDALVVGEATNGDIIYAHSGSFNYRIVSHGKSVHSSTPELGNNALDALVDFAAIERTLFDDVPRDPYLGELKHSVTILNVGEQVNTIPDEGELYGNIRPTSAFNNKQIVERLKSAVDEVNDKNGAKLTFELIHDWYPVVSNPEDDFVQTALTVSQEVFSNYVEGKQPELITMNGATDASVFVKDNTNLPVIILGPGESNVSHQIDEYTTISSYLALVEIYKQIILRYFE GT:EXON 1|1-382:0| BL:SWS:NREP 1 BL:SWS:REP 3->382|DAPE_STAAW|1e-69|37.3|373/407| PROS 64->73|PS00758|ARGE_DAPE_CPG2_1|PDOC00613| PROS 100->138|PS00759|ARGE_DAPE_CPG2_2|PDOC00613| PROS 171->183|PS01121|CASPASE_HIS|PDOC00864| SEG 107->117|laalaiaiiel| BL:PDB:NREP 1 BL:PDB:REP 3->379|1vgyA|2e-21|30.3|353/370| RP:PDB:NREP 1 RP:PDB:REP 3->380|1cg2A|6e-41|21.9|361/389| RP:PFM:NREP 1 RP:PFM:REP 66->378|PF01546|2e-18|31.6|294/308|Peptidase_M20| HM:PFM:NREP 1 HM:PFM:REP 66->378|PF01546|1.6e-36|33.7|166/171|Peptidase_M20| GO:PFM:NREP 2 GO:PFM GO:0008152|"GO:metabolic process"|PF01546|IPR002933| GO:PFM GO:0016787|"GO:hydrolase activity"|PF01546|IPR002933| RP:SCP:NREP 3 RP:SCP:REP 3->250|1vgyA1|8e-31|25.9|239/262|c.56.5.4| RP:SCP:REP 242->293|1eqkA|4e-04|30.8|52/102|d.17.1.2| RP:SCP:REP 317->381|1vgyA1|6e-07|30.8|62/262|c.56.5.4| HM:SCP:REP 3->382|1lfwA1|3.3e-59|34.3|245/0|c.56.5.4|1/1|Zn-dependent exopeptidases| OP:NHOMO 1177 OP:NHOMOORG 659 OP:PATTERN 111-22-322222223-2222112---2114----11-111----1--1----211212212112-11 122--21-11111------------1-----------21-----1-----1-1-111-----1---------------2---2--1111111-1----11-1-11-1111--------------------------11111----2-------------------------------------1--11--1-11333333422342333212221232112411-1111114--22222122222222433342-4-22-3---2233221211-11-1-------------------------------------------1-2---1111111111-4------11-1----1-11-11--1-2--1-1--3-1122-111112-3331123223111111111112-221223121221433222222211221-11232122322222222222331111111-11111--11111111111111111-12212--122133222432222222222222223332132113322221-213-4111-11112-1111111111111-22-1-121-1--1-111----1---1-111---------1-----------1---1--322222322221-1---23111-3122-22---233221122222323223333333333-33333333333333333324632222222222222222222222322222321222222222222-1121111122221124322221221111211211111122221233333234232222334---------12222222222222211--------11111111111111--------1----------------------------22221-111-1- --------11---111-3221222-2211----332----------2212334322------111-------111---------------4---1--------------2------------------------------------------------1----1---------------7---------2-1------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 382 STR:RPRED 100.0 SQ:SECSTR ccHHHHHHHHHHHHTccccTTcHHHHHHHHHHHHHHTTcEEEEEEccTTccEEEEEEccccccEEEEEEccccccTTHGTHHHcccccEEETTEEEcTTTTTTHHHHHHHHHHHHHHHHTTccccEEEEEEEccGGGTTTTTHHHHHTHHHHHccEEEEcccEETTEEcEEcEEEEEEEEEEcccEETTcGGGcccHHHHHHHHHHHHGGGccTTTTEEEcccEccEEEEEEEcccTTEEccEEEEEEEEEEccHHHHHHHHHHHHHHHTccccTcTcEEEEEEEEccccEEcHHHHHHHHHHHHHHHHHEEEETTcccEEEcccccccTHHHHGGGccccEEcccccEEEcTTcccccEEEGGGHHHHHHHHHHHHHHHHT DISOP:02AL 1-2| PSIPRED ccHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHcccEEEEEEcccccEEEEEEEcccccEEEEEEEccEEccccccccccccccEEEEccEEEccccccccHHHHHHHHHHHHHHHcccccccEEEEEEcccccccHHHHHHHHccccccccEEEEcccccccEEEEEEEEEEEEEEEEEEccccccccccccHHHHHHHHHHHHHHHHHHccccccccccEEEEEEEEccccccccccEEEEEEEEEEcccccHHHHHHHHHHHHHHHHHHcccEEEEEEEEcccccccccccHHHHHHHHHHHHHHHHcccccccEEEEEccccHHHHHHHHcccccEEEEccccccccccccccEEHHHHHHHHHHHHHHHHHHHc //