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Lactobacillus salivarius UCC118 (lsal0)
Gene : ABD98955.1
DDBJ      :             Ornithine decarboxylase
Swiss-Prot:             

Homologs  Archaea  3/68 : Bacteria  341/915 : Eukaryota  5/199 : Viruses  0/175   --->[See Alignment]
c.67.1d.125.1
:699 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   31->698 1ordA PDBj e-177 46.0 %
:RPS:PDB   103->699 1c4kA PDBj 6e-61 44.9 %
:RPS:SCOP  96->551 1c4kA2  c.67.1.5 * e-123 47.1 %
:RPS:SCOP  552->699 1c4kA3  d.125.1.1 * 5e-35 54.1 %
:HMM:SCOP  96->551 1c4kA2 c.67.1.5 * 5.3e-96 28.3 %
:HMM:SCOP  552->688 1c4kA3 d.125.1.1 * 1.8e-40 37.2 %
:RPS:PFM   98->528 PF01276 * OKR_DC_1 2e-57 42.4 %
:RPS:PFM   591->662 PF03711 * OKR_DC_1_C 3e-12 45.7 %
:HMM:PFM   97->531 PF01276 * OKR_DC_1 7.8e-146 43.7 412/417  
:HMM:PFM   558->689 PF03711 * OKR_DC_1_C 3.8e-51 50.0 132/137  
:BLT:SWISS 82->699 DCOR_HAEIN e-177 48.5 %
:PROS 337->351|PS00703|OKR_DC_1

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABD98955.1 GT:GENE ABD98955.1 GT:PRODUCT Ornithine decarboxylase GT:DATABASE GIB00337CH01 GT:ORG lsal0 GB:ACCESSION GIB00337CH01 GB:LOCATION 155872..157971 GB:FROM 155872 GB:TO 157971 GB:DIRECTION + GB:PRODUCT Ornithine decarboxylase GB:NOTE COG1982 [E] Arginine/lysine/ornithine decarboxylases GB:PROTEIN_ID ABD98955.1 GB:DB_XREF GI:90820316 LENGTH 699 SQ:AASEQ MANKILKIGTTSTTEEYVPLPWLSSNVYSGITAAELAAFVLPKADEVAYQKAQELMAKDGLQVPVILVDAGESLSKEELQNKVAQAAQQYEAENVPGFLRDLINFADEKPVSYTTPGHHNGQFYEKHPAGVVFKKFFGDNMLRADVSDTVAELGDTLTHGGTPLDSEQEAAQAFNADKVYYVTNGTTSSNTICANAVLSEGDLVLFDRNNHKSLYNSALIMTGAKPVYLPTSRNPLGLIGPVISDDLDEEKIRAEIAKVDPERAKAKRPFRMAVLQLETFDGVFYNAKWLLDKIGKLCDYVLFDCAWGGYEQFVNIMKQLSPLQYQYTADDPGILVTQSIHKQQAGLAQTSQILKKDAHIKGQKRYVDHKHFNNAYLKYVTTSYSYPIYASLTVNTALAKGEAPKKWWEEAMRKGIRFRKALNQKSKLFKTLNAQEINEKSEQELMDNLSYWKMEETDDWHGFKGIAKDEAIISPLKLTVVCPGINLATGKYEETGIPGKVIGEYLTEKRVITCKSDLYSTLFLLTPGERDADLEALLTSFLEFEEYYLRDAPLEQVLPRLVKQNPERYQGYTIRQLCQEMHEYYAKNEIYKLQQDLFLKKTFQDYEMTPAEADKLFMKNEGELVDLDEIEGRVALEGALPYPPGVFIVAPGEKWQKIDVDYFKILMGAIDKFPGFDPEIQGVYLDKDTGVTKAQGFVL GT:EXON 1|1-699:0| BL:SWS:NREP 1 BL:SWS:REP 82->699|DCOR_HAEIN|e-177|48.5|618/720| PROS 337->351|PS00703|OKR_DC_1|PDOC00585| BL:PDB:NREP 1 BL:PDB:REP 31->698|1ordA|e-177|46.0|665/730| RP:PDB:NREP 1 RP:PDB:REP 103->699|1c4kA|6e-61|44.9|590/728| RP:PFM:NREP 2 RP:PFM:REP 98->528|PF01276|2e-57|42.4|361/368|OKR_DC_1| RP:PFM:REP 591->662|PF03711|3e-12|45.7|70/95|OKR_DC_1_C| HM:PFM:NREP 2 HM:PFM:REP 97->531|PF01276|7.8e-146|43.7|412/417|OKR_DC_1| HM:PFM:REP 558->689|PF03711|3.8e-51|50.0|132/137|OKR_DC_1_C| GO:PFM:NREP 2 GO:PFM GO:0003824|"GO:catalytic activity"|PF01276|IPR000310| GO:PFM GO:0003824|"GO:catalytic activity"|PF03711|IPR008286| RP:SCP:NREP 2 RP:SCP:REP 96->551|1c4kA2|e-123|47.1|456/462|c.67.1.5| RP:SCP:REP 552->699|1c4kA3|5e-35|54.1|148/161|d.125.1.1| HM:SCP:REP 96->551|1c4kA2|5.3e-96|28.3|441/462|c.67.1.5|1/1|PLP-dependent transferases| HM:SCP:REP 552->688|1c4kA3|1.8e-40|37.2|137/161|d.125.1.1|1/1|Ornithine decarboxylase C-terminal domain| OP:NHOMO 651 OP:NHOMOORG 349 OP:PATTERN -------------------------------------------1-11--------------------- ---------------1111-1-111-11111------------------------------------------------------------------------1-------------------------------------------11---11-11-1----1-----1--------------------1112-----11111111-111222211-111111-1-----31---------------------1-2112-121----12-1-----------------11111111111-----------------------11222222222212221221121122---1-------11-1-12221111------------11211---1---1------------11111111-------1-2----2221-------------------------11-------------------------------------2111123333221111221311111142211111111111111111111111121121---------1111-----------------------------------------------------------11---1---1-11111---1111-1--1----1----------33115325556556654-554555655556455555433311111554555555543535552323334--422222223222---1----------------------1-1-211------1--111222211111-1111---111-11111-212-2222222-2211----------------11----------------------------------------------------- 11------1-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------2-----1---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 666 STR:RPRED 95.3 SQ:SECSTR ##############################HHHHHHTcccccE###EEEEccGGGccHHHHTTccEEEETTccTTHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHTcccccccccTTTTTTTGGGcHHHHHHHHHHccHHHHccccTTcGGGccTTTTcTHHHHHHHHHHHHTTccEEEEEccHHHHHHHHHHHHHccTTcEEEEETTccHHHHHHHTTTTccEEEEEcEEEcTTccEEEEcGGGccHHHHHHHTTTccHHHHTccccccEEEEEcccTTcEEEcHHHHHHHHGGGccEEEEEcTTccGGGccGGGGGGcTTccccccTTccEEEEEcHHHHccccTTcEEEEEEcGGGTTcTTcccHHHHHHHHHHHccccccHHHHHHHcEETHHHHHHHcHHHHHHHHHHHHHHHHHHGGHHHHHHHTTcccEEccccEETTGccHHHHTTcGGGGcccTTcTccTTccTTcEEEcTTEEEEEcccEETTccccHHHHHHHHHHTTccccEEcccEEEEEccTTccHHHHHHHHHHHHHHHHHHHTTccHHHHcHHHHTTcTTTcTTccHHHHHHHHHHHHHTTTHHHHHHHTTcGGGccEEcccHHHHHHHHHTTcEEEEETTTcTTcccccccEETTTccccccTTEEccHHHHHHHHHHHHHHHHcTTccccEEccEEEEETTEEEEEEEEE DISOP:02AL 1-3| PSIPRED ccccEEEEEcccccEEEEEcccccccHHHHHHHHcccEEEEccHHHHHcccHHHHHHHHcccccEEEEEccccccHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHcccccEEcccccccccccccHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHcccEEEEEEccHHHHHHHHHHHHcccccEEEEEcccHHHHHHHHHHHcccEEEEcccccccccccccccHHHccHHHHHHHHHHHHHHHHHHccccEEEEEEccccccccccHHHHHHHHHHcccEEEEEccccccEEccccccccccccccccccccEEEEEEccHHccccccHHHHHHcccHHHcccHHcccHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHccccEEccccccccccccccccccHHHHccccccccccccccccccEEEccEEEEEEccccccccccHHHccccHHHHHHHHHHHccEEEcccccEEEEEEcccccHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHcHHHHccccHHHHHHHHHHHHHHccHHHHHHHHccccccccccccHHHHHHHHHHccccEEEHHHcccEEEEccccccccccEEEcccccccHHHHHHHHHHHHHccccccccccccEEEEEEEccEEEEEEEEc //