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Lactobacillus salivarius UCC118 (lsal0)
Gene : ABD98965.1
DDBJ      :             Short chain dehydrogenase
Swiss-Prot:             

Homologs  Archaea  49/68 : Bacteria  836/915 : Eukaryota  191/199 : Viruses  0/175   --->[See Alignment]
c.2.1
:264 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   5->258 2q2vA PDBj 8e-24 35.2 %
:RPS:PDB   5->260 2ae1A PDBj 2e-38 24.9 %
:RPS:SCOP  9->259 1pwxA  c.2.1.2 * 3e-39 22.2 %
:HMM:SCOP  3->258 1zemA1 c.2.1.2 * 4.5e-61 29.9 %
:RPS:PFM   8->158 PF00106 * adh_short 5e-17 35.6 %
:HMM:PFM   8->170 PF00106 * adh_short 1.6e-25 18.5 157/167  
:BLT:SWISS 1->264 YVAG_BACSU 2e-71 52.3 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABD98965.1 GT:GENE ABD98965.1 GT:PRODUCT Short chain dehydrogenase GT:DATABASE GIB00337CH01 GT:ORG lsal0 GB:ACCESSION GIB00337CH01 GB:LOCATION 166411..167205 GB:FROM 166411 GB:TO 167205 GB:DIRECTION + GB:PRODUCT Short chain dehydrogenase GB:NOTE COG1028 [IQR] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) GB:PROTEIN_ID ABD98965.1 GB:DB_XREF GI:90820326 LENGTH 264 SQ:AASEQ MELGLKGKTALVTGSTKGIGKAIAIELAREGTDVIINGRKKETVDKVVAEIKEEFPDTNPQAAPFDISIPEQQKELFKNFPKVDILINNMGIFKPMEYFDIDQETWQHFIDVNFYSGNALAKFYLPKMLAEDFGRIIFIASEEALMPSGEMPQYSLTKTMNLSLAKSLSKLTKGTHVTVNTIMPGSTLTEGVEQMLVDMYKDSGLPKDEWETDFMKNHRPLSQIQRLIRPEEVGRFTAFVSSPYSSSFSGEALRLDGGLVPTIF GT:EXON 1|1-264:0| BL:SWS:NREP 1 BL:SWS:REP 1->264|YVAG_BACSU|2e-71|52.3|264/264| SEG 162->173|lslakslskltk| SEG 241->249|sspysssfs| BL:PDB:NREP 1 BL:PDB:REP 5->258|2q2vA|8e-24|35.2|244/255| RP:PDB:NREP 1 RP:PDB:REP 5->260|2ae1A|2e-38|24.9|237/252| RP:PFM:NREP 1 RP:PFM:REP 8->158|PF00106|5e-17|35.6|149/169|adh_short| HM:PFM:NREP 1 HM:PFM:REP 8->170|PF00106|1.6e-25|18.5|157/167|adh_short| GO:PFM:NREP 2 GO:PFM GO:0008152|"GO:metabolic process"|PF00106|IPR002198| GO:PFM GO:0016491|"GO:oxidoreductase activity"|PF00106|IPR002198| RP:SCP:NREP 1 RP:SCP:REP 9->259|1pwxA|3e-39|22.2|239/252|c.2.1.2| HM:SCP:REP 3->258|1zemA1|4.5e-61|29.9|254/0|c.2.1.2|1/1|NAD(P)-binding Rossmann-fold domains| OP:NHOMO 6392 OP:NHOMOORG 1076 OP:PATTERN 11212445657564541611111-6--62225-1---------11-53--412-22112-22734-14 99J1C1-2223231KEB33-3H11AO212227EJKJ8ERL472G5341-621B8731411756344FAA84--------134D11222433413-11--45D287Y9L4B111111111111112323423122529662422245ABBA6444411---1222615FAL71-11122-21116541153-95GBBBBB8BCC8CBABAEAGG9GB896BCCCB57666768M6332222122333226676862514514-1-234433241269533444455532223333333333474465666666623222133343356A333343343455662344622113621174121115332244411629B66B1212276RGC238CCA9733333343447-89786C79EFH2MGGCGHHJNJCFBA798B48A59E666333333338A89455411-1222211--1121112112--11111768E857FFAFFFHFLG78787BBKJ999948MCKBUIJ37BAA6364686C4F97A5152542--1-111111B641C6331121-233-224326-22113319E11-123111111-231221222322--4432745776A5423434197534453355231--322211----87B91C46668677777-7567767586658666667EFE644358667778777767677H445554521744444444444111734333555616AA61112231111122419BCEC6D485A4797867HEB98BBABBB4232342321444733333354669987777667543411-1996566--------1-2----------1--------------4433134453241 22-1495-72312469AB9DEGAKDJG9935455547978698443CB999EJM59755765-3522414122411322311113323-966A1B51312434833-572VIJBFI433324A2B72D3KkE-EAE3234C14A7343138129577GFIKJAHJH8GAIHBPAJ4341J--15C5BFMBQB47A5451 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 264 STR:RPRED 100.0 SQ:SECSTR cccccTTcEEEEETcccHHHHHHHHHHHTTTcEEEEEEccHHHHHHHHHHHHHTTccEcEEEEEccTTcHHHHHHHHHHTTTcccEEEcccccccccGGGccHHHHHHHHHHHTHHHHHHHHHHHHHHHTTccEEEEEEccGGGTcccTTcHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEcccccccHHHHGGGGcTTcTHcTHHHHHHHHHHTccccTccccccHHHHHHHHHHHHcGGGTTccccEEEEcTTGGTGcc DISOP:02AL 1-1| PSIPRED ccccccccEEEEEccccHHHHHHHHHHHHcccEEEEEEccHHHHHHHHHHHHHcccccEEEEEEcccccHHHHHHHHHHHccccEEEEcccccccccHHHccHHHHHHHHHHHcHHHHHHHHHHHHHHHHccccEEEEEccccEEccccccHHHHHHHHHHHHHHHHHHHHHcccccEEEEEcccccccHHHHHHHHHHHHHccccHHHHHHHHHHHHHccccccccccHHHHHHHHHHHcccccccccccEEEEccccHHHHc //