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Lactobacillus salivarius UCC118 (lsal0)
Gene : ABD98978.1
DDBJ      :             Transcription regulator of fructose operon
Swiss-Prot:             

Homologs  Archaea  2/68 : Bacteria  553/915 : Eukaryota  4/199 : Viruses  0/175   --->[See Alignment]
a.4.5c.124.1
:251 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   4->49 1i1gA PDBj 7e-04 32.6 %
:RPS:PDB   1->55 1biaA PDBj 2e-10 18.2 %
:RPS:PDB   39->250 3dlxB PDBj 1e-23 11.0 %
:RPS:SCOP  3->56 1lvaA4  a.4.5.35 * 2e-11 16.7 %
:RPS:SCOP  75->226 2ahuA1  c.124.1.3 * 1e-22 7.6 %
:HMM:SCOP  2->81 1stzA1 a.4.5.51 * 6.6e-14 41.2 %
:HMM:SCOP  73->235 1lk5A1 c.124.1.4 * 7.7e-32 27.1 %
:RPS:PFM   6->56 PF08220 * HTH_DeoR 3e-07 54.9 %
:RPS:PFM   77->229 PF00455 * DeoR 5e-31 43.1 %
:HMM:PFM   76->229 PF00455 * DeoR 4.3e-40 37.0 154/157  
:HMM:PFM   6->58 PF08220 * HTH_DeoR 3e-16 47.2 53/57  
:BLT:SWISS 1->249 FRUR_BACSU 6e-56 43.4 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABD98978.1 GT:GENE ABD98978.1 GT:PRODUCT Transcription regulator of fructose operon GT:DATABASE GIB00337CH01 GT:ORG lsal0 GB:ACCESSION GIB00337CH01 GB:LOCATION 187630..188385 GB:FROM 187630 GB:TO 188385 GB:DIRECTION + GB:PRODUCT Transcription regulator of fructose operon GB:NOTE COG1349 [KG] Transcriptional regulators of sugar metabolism GB:PROTEIN_ID ABD98978.1 GB:DB_XREF GI:90820339 LENGTH 251 SQ:AASEQ MLAEERHRIILELLKEHNVVKLQDICERTQCSESSGRRDLQLLEERGLLVRVHGGAKMKQPLQRELDVMGKSAQNTQEKESLGAKAASYIQDDDVIYLDAGTSTIAIIPYLSEDQHLTVVTNGVEHASLLADKNIRTFLLGGRLKNTTKAIIGVEAANDLKRFRFNKAFLGINGVHEKYGLTTPDPDEAEIKRTALERSEKGYVIADKSKFGYVSFVKVADVTDATIITSTLPASVAKQYSSQATIQEVIL GT:EXON 1|1-251:0| BL:SWS:NREP 1 BL:SWS:REP 1->249|FRUR_BACSU|6e-56|43.4|249/251| BL:PDB:NREP 1 BL:PDB:REP 4->49|1i1gA|7e-04|32.6|46/140| RP:PDB:NREP 2 RP:PDB:REP 1->55|1biaA|2e-10|18.2|55/292| RP:PDB:REP 39->250|3dlxB|1e-23|11.0|210/465| RP:PFM:NREP 2 RP:PFM:REP 6->56|PF08220|3e-07|54.9|51/56|HTH_DeoR| RP:PFM:REP 77->229|PF00455|5e-31|43.1|153/157|DeoR| HM:PFM:NREP 2 HM:PFM:REP 76->229|PF00455|4.3e-40|37.0|154/157|DeoR| HM:PFM:REP 6->58|PF08220|3e-16|47.2|53/57|HTH_DeoR| GO:PFM:NREP 3 GO:PFM GO:0003700|"GO:transcription factor activity"|PF08220|IPR001034| GO:PFM GO:0005622|"GO:intracellular"|PF08220|IPR001034| GO:PFM GO:0006355|"GO:regulation of transcription, DNA-dependent"|PF08220|IPR001034| RP:SCP:NREP 2 RP:SCP:REP 3->56|1lvaA4|2e-11|16.7|54/60|a.4.5.35| RP:SCP:REP 75->226|2ahuA1|1e-22|7.6|144/242|c.124.1.3| HM:SCP:REP 2->81|1stzA1|6.6e-14|41.2|80/87|a.4.5.51|1/1|"Winged helix" DNA-binding domain| HM:SCP:REP 73->235|1lk5A1|7.7e-32|27.1|144/150|c.124.1.4|1/1|NagB/RpiA/CoA transferase-like| OP:NHOMO 2178 OP:NHOMOORG 559 OP:PATTERN ------------------------2--1---------------------------------------- 33--9323445111-------3---4------322212221--1811-12236461-4--2135649655311111112---1--------1--------13--14-6-B--------------------------22211----------------------------1-------------321--22-31433333334243333375442434411123336666666A2222222222222224322342-1481-32255--881411--3433343333444444444444444444444444444534221333551177332334363513--24422213-2121----1--1--42226222--12--------1-113---1311144444444446-111112221A--C665456997662----3225245422111111113112---3-------------------------------1---111113445432333344783333135362232--1211-1111-1323-------311111111----1---2---12--1---1-------11-----1-----------------------------5382-1111233111111122211111111-------------7577764BA9EBDDDBB-ACBBABCBBCAEBABBCB6ECE56432E9DEEDEDDCDDDEEDAA98BBA93-766666556666---------------136333647123225885----------3133232534222222455----------333444444432692211111----------4---------------------1---2-1------21-------41--13111-1- -------------2------------------------------------------------------------------------------------------------------------------------------------------------1----1------4---------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 250 STR:RPRED 99.6 SQ:SECSTR ccccEEEEEcTTccEEEEEEEEcEEEcTEEEEEEcTcccTTcccGGGccccGGGcccEEEEcccccccccccccccHHHHHHHHHHGGGccTTEEEEEcTTHHHHHGGGccTTTccEEEEETTTEEEEcccccGccTTcccccEEEEEEEccHHHHHHHHHTTcccEEEEcccEEETTccEEccccTccTTHHHHTccTTcEEEEEGEEcEEcccccccccccccEEEcccEEEEEETTTEEEccHHHHH# DISOP:02AL 1-4| PSIPRED ccHHHHHHHHHHHHHHcccEEHHHHHHHHcccHHHHHHHHHHHHHcccEEEEccEEEEcccccccccHHHHHHHHHHHHHHHHHHHHHHcccccEEEEcccHHHHHHHHHHHccccEEEEEccHHHHHHHHHcccEEEEEccEEEccccEEEcHHHHHHHHcccccEEEEEccccccccccccccHHHHHHHHHHHHHcccEEEEEccccccccEEEEEEEHHHEEEEEccccHHHHHHHHHHcccEEEEc //