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Lactobacillus salivarius UCC118 (lsal0)
Gene : ABD98995.1
DDBJ      :             Transcriptional regulator, LytR family
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  299/915 : Eukaryota  2/199 : Viruses  0/175   --->[See Alignment]
:360 amino acids
:PSIPRED
:DISOPRED
:RPS:PFM   115->253 PF03816 * LytR_cpsA_psr 1e-32 51.5 %
:HMM:PFM   115->259 PF03816 * LytR_cpsA_psr 2.6e-46 43.4 143/148  
:HMM:PFM   25->95 PF09323 * DUF1980 0.00076 20.6 68/182  
:BLT:SWISS 90->339 LYAT_ENTFA 2e-54 44.9 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABD98995.1 GT:GENE ABD98995.1 GT:PRODUCT Transcriptional regulator, LytR family GT:DATABASE GIB00337CH01 GT:ORG lsal0 GB:ACCESSION GIB00337CH01 GB:LOCATION complement(206783..207865) GB:FROM 206783 GB:TO 207865 GB:DIRECTION - GB:PRODUCT Transcriptional regulator, LytR family GB:NOTE COG0583 [K] Transcriptional regulator GB:PROTEIN_ID ABD98995.1 GB:DB_XREF GI:90820356 LENGTH 360 SQ:AASEQ MPQDNRRRRRSIENYQNDTSSHVPQRQHEHHHSPHRLSKTIFFWLLLSLVVFAIVGGKYLEKKLNNAQKAANTIYSSSNFSKSRNVSSTLKKGKPVSILLMGTDTGALGRDFRGRTDTLIVLVMNPKDKKMTLVSLPRDEKVAISGYEEYYPSKLNSAYFYGGSKAAVRTVQQDLNIPIDFYVTVNMGGLESIINAIGGVDVAPTISFSYGGYSFKKGKVTHMNGPKALAYVRMRHEDPLGDYGRQTRQRQVLMKVALKSSHVSNLLNQKFLNTISKQMQTDLSFDDLLALGTKYRVATHGMDSDHLQGTSTMIMGESFEIPTLSEKQRITNKVRSALDLEKAKTGSTYGTDYEINTSQY GT:EXON 1|1-360:0| BL:SWS:NREP 1 BL:SWS:REP 90->339|LYAT_ENTFA|2e-54|44.9|247/303| TM:NTM 1 TM:REGION 37->59| SEG 76->88|sssnfsksrnvss| RP:PFM:NREP 1 RP:PFM:REP 115->253|PF03816|1e-32|51.5|134/145|LytR_cpsA_psr| HM:PFM:NREP 2 HM:PFM:REP 115->259|PF03816|2.6e-46|43.4|143/148|LytR_cpsA_psr| HM:PFM:REP 25->95|PF09323|0.00076|20.6|68/182|DUF1980| OP:NHOMO 778 OP:NHOMOORG 301 OP:PATTERN -------------------------------------------------------------------- ---1412122221234422-22223222222233333333244521222--3122221--21414557544222211122222--------------------------1--------------------------24433---2112212221122--11-122212222-1-----1----1221111-113666666666666666325543666222426433333353433333333333333333435334334233434223333244211122222223223233333333322222222222223323333333242312222222121-2--24445123132211221112111211312-1-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------11---11111--- -------------1---------------------------------------------------------------------------------------------------------------------------------------------------------------------------1------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 1-34,79-92,108-111,262-263,354-361| PSIPRED ccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccEEEEEEEEEEcccccccccccEEEEEEEEEccccEEEEEEEccccEEEccccccccHHHHHHHHHcccHHHHHHHHHHHHcccccEEEEEEHHHHHHHHHHcccEEccccccccccccEEccccEEEEcHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHcccccHHHHHHHHHHHHHHHcccEEEEEEEEEEEEccEEEEEccHHHHHHHHHHHHHHccccccccccccccccccccccc //