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Lactobacillus salivarius UCC118 (lsal0)
Gene : ABD99010.1
DDBJ      :             Transcriptional regulator ctsR
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  166/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
a.4.5
:155 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   5->143 3h0dB PDBj 6e-30 53.4 %
:RPS:SCOP  1->70 1fp2A1  a.4.5.29 * 9e-04 11.6 %
:RPS:PFM   5->152 PF05848 * CtsR 3e-31 55.9 %
:HMM:PFM   4->152 PF05848 * CtsR 5.9e-62 50.0 148/152  
:BLT:SWISS 5->148 CTSR_STAHJ 9e-34 46.2 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABD99010.1 GT:GENE ABD99010.1 GT:PRODUCT Transcriptional regulator ctsR GT:DATABASE GIB00337CH01 GT:ORG lsal0 GB:ACCESSION GIB00337CH01 GB:LOCATION 231806..232273 GB:FROM 231806 GB:TO 232273 GB:DIRECTION + GB:PRODUCT Transcriptional regulator ctsR GB:NOTE COG4463 [K] Transcriptional repressor of class III stress genes GB:PROTEIN_ID ABD99010.1 GB:DB_XREF GI:90820371 LENGTH 155 SQ:AASEQ MQNRNISDIIEQYLKDILADSRRIEIKRSEIAQQFDCVPSQINYVIKTRFTLKNGYVVKSKRGGGGYIRIVKVDLAENQSVLDDLISAIGTEITENQAYQLISSLYEDGVFSRKEANYVLAAISRQALDLPTAEMENMIRARILVSILNQLRCEE GT:EXON 1|1-155:0| BL:SWS:NREP 1 BL:SWS:REP 5->148|CTSR_STAHJ|9e-34|46.2|143/153| BL:PDB:NREP 1 BL:PDB:REP 5->143|3h0dB|6e-30|53.4|133/143| RP:PFM:NREP 1 RP:PFM:REP 5->152|PF05848|3e-31|55.9|145/152|CtsR| HM:PFM:NREP 1 HM:PFM:REP 4->152|PF05848|5.9e-62|50.0|148/152|CtsR| RP:SCP:NREP 1 RP:SCP:REP 1->70|1fp2A1|9e-04|11.6|69/101|a.4.5.29| OP:NHOMO 166 OP:NHOMOORG 166 OP:PATTERN -------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------111111111111111111111111111111111111111111111111111111111111111-1-11-1---111111111--1111111111111111111111111111111111111111111111111--11111111111111111111-11111--1111111111111111----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 133 STR:RPRED 85.8 SQ:SECSTR ####cHHHHHHHHHHHHHcTTcEEEEcHHHHHHHTTccTHHHHHHHHHHccTTTTEEEEEEccTTcEEEE#EcccccHHHHHHHHHHHccccccHHHHHHHHHHH#HTTcccHHHHH###HHHcHHHHcccTTHHHH#HHHHH############ DISOP:02AL 1-4,154-156| PSIPRED cccccHHHHHHHHHHHHHHHccccHHHHHHHHHHHcccccHHEEEEEEEEcccccEEEEEEEccccEEEEEEEEcccHHHHHHHHHHHHcccccHHHHHHHHHHHHHcccccHHHHHHHHHHHccHHcccccccHHHHHHHHHHHHHHHHHcccc //