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Lactobacillus salivarius UCC118 (lsal0)
Gene : ABD99027.1
DDBJ      :             Multidrug resistance ABC transporter ATP-binding and permease protein
Swiss-Prot:             

Homologs  Archaea  68/68 : Bacteria  908/915 : Eukaryota  197/199 : Viruses  1/175   --->[See Alignment]
c.37.1f.37.1
:577 amino acids
:PSIPRED
:DISOPRED
:BLT:PDB   74->571 2hydA PDBj 8e-64 30.3 %
:RPS:PDB   74->571 3b60A PDBj 7e-64 29.9 %
:RPS:SCOP  11->312 2hydA2  f.37.1.1 * 6e-38 15.9 %
:RPS:SCOP  333->573 1b0uA  c.37.1.12 * 1e-41 25.4 %
:HMM:SCOP  1->327 1pf4A2 f.37.1.1 * 5.1e-68 26.9 %
:HMM:SCOP  333->556 1pf4A1 c.37.1.12 * 1.2e-61 38.8 %
:RPS:PFM   29->277 PF00664 * ABC_membrane 3e-24 25.8 %
:RPS:PFM   350->391 PF03193 * DUF258 6e-04 50.0 %
:RPS:PFM   374->499 PF00005 * ABC_tran 6e-10 34.2 %
:HMM:PFM   15->284 PF00664 * ABC_membrane 1.2e-37 23.4 269/275  
:HMM:PFM   374->497 PF00005 * ABC_tran 7.3e-22 32.4 111/118  
:HMM:PFM   349->391 PF03193 * DUF258 1.3e-05 38.1 42/161  
:BLT:SWISS 1->577 Y1304_MYCBO e-103 37.5 %
:PROS 471->485|PS00211|ABC_TRANSPORTER_1
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABD99027.1 GT:GENE ABD99027.1 GT:PRODUCT Multidrug resistance ABC transporter ATP-binding and permease protein GT:DATABASE GIB00337CH01 GT:ORG lsal0 GB:ACCESSION GIB00337CH01 GB:LOCATION 260504..262237 GB:FROM 260504 GB:TO 262237 GB:DIRECTION + GB:PRODUCT Multidrug resistance ABC transporter ATP-binding and permease protein GB:NOTE COG1132 [V] ABC-type multidrug transport system, ATPase and permease components GB:PROTEIN_ID ABD99027.1 GB:DB_XREF GI:90820388 LENGTH 577 SQ:AASEQ MVKLMRRNLDWWAVITATIFLGFQVVCDLSLPNLTSNLINNGVAKGNVGYIWQIGLQMLGLTLVGIFAAAGNVYFASTQAQKMGARLRGKIFKKVLSFGNYEMDKFGSSSLITRTTNDVMQIQNVTIMMLRMMIMAPLMLIGASVMAYFNEKRLTSIFLVSIPILLIAIGCAMYFAVPLFQKLQKQIDRINLIFREGLTGVRVIRAFRQDKFEQERFDRANKDYTETGIKVFSIVSLMFPIMTLVLNVTNMGIIWFGAKLIANHEMQVGNLVAFMTYASMILFSFMMLSMIFVLVPRAEAAAKRINAVLEIENSINDVESEIDSDKDKLRASLEFKDVSFRYRGAEDLALDNLSVDVKAGETLAIIGGTGSGKSTLINLIPRLYDVNSGEVLVDGNDVRKYSLHDLHDKVAFVQQKAVLFKGTIRSNLLIGNPEATEEDMWKALEIAQAKDFISDLPDGLDAVVEQGGDNFSGGQKQRLAIARAIIKPASIYVFDDSFSALDFKTDAKLRLALRQDERISKAIIVIVAQRISTVTGADHIVVLDEGKVVGQGTHKELLADNTTYQEIVESQMKGAAI GT:EXON 1|1-577:0| BL:SWS:NREP 1 BL:SWS:REP 1->577|Y1304_MYCBO|e-103|37.5|571/582| PROS 471->485|PS00211|ABC_TRANSPORTER_1|PDOC00185| TM:NTM 6 TM:REGION 9->31| TM:REGION 53->75| TM:REGION 124->146| TM:REGION 157->179| TM:REGION 234->256| TM:REGION 275->297| SEG 127->141|immlrmmimaplmli| SEG 279->292|smilfsfmmlsmif| BL:PDB:NREP 1 BL:PDB:REP 74->571|2hydA|8e-64|30.3|488/578| RP:PDB:NREP 1 RP:PDB:REP 74->571|3b60A|7e-64|29.9|492/572| RP:PFM:NREP 3 RP:PFM:REP 29->277|PF00664|3e-24|25.8|248/274|ABC_membrane| RP:PFM:REP 350->391|PF03193|6e-04|50.0|40/160|DUF258| RP:PFM:REP 374->499|PF00005|6e-10|34.2|120/123|ABC_tran| HM:PFM:NREP 3 HM:PFM:REP 15->284|PF00664|1.2e-37|23.4|269/275|ABC_membrane| HM:PFM:REP 374->497|PF00005|7.3e-22|32.4|111/118|ABC_tran| HM:PFM:REP 349->391|PF03193|1.3e-05|38.1|42/161|DUF258| GO:PFM:NREP 9 GO:PFM GO:0005524|"GO:ATP binding"|PF00664|IPR001140| GO:PFM GO:0006810|"GO:transport"|PF00664|IPR001140| GO:PFM GO:0016021|"GO:integral to membrane"|PF00664|IPR001140| GO:PFM GO:0042626|"GO:ATPase activity, coupled to transmembrane movement of substances"|PF00664|IPR001140| GO:PFM GO:0055085|"GO:transmembrane transport"|PF00664|IPR001140| GO:PFM GO:0003924|"GO:GTPase activity"|PF03193|IPR004881| GO:PFM GO:0005525|"GO:GTP binding"|PF03193|IPR004881| GO:PFM GO:0005524|"GO:ATP binding"|PF00005|IPR003439| GO:PFM GO:0016887|"GO:ATPase activity"|PF00005|IPR003439| RP:SCP:NREP 2 RP:SCP:REP 11->312|2hydA2|6e-38|15.9|302/323|f.37.1.1| RP:SCP:REP 333->573|1b0uA|1e-41|25.4|236/258|c.37.1.12| HM:SCP:REP 1->327|1pf4A2|5.1e-68|26.9|305/311|f.37.1.1|1/1|ABC transporter transmembrane region| HM:SCP:REP 333->556|1pf4A1|1.2e-61|38.8|219/244|c.37.1.12|1/1|P-loop containing nucleoside triphosphate hydrolases| OP:NHOMO 37055 OP:NHOMOORG 1174 OP:PATTERN IH93E8DCDEDBECIBV7BF9BBLVEFMVDQIC7ABB7B9B57ILJLUCLyiQ8DNDEJEJ9C5M236 KJUB*SXUcceKRKOMMJJ-JQ88RzJJJJJKRSRSe*vwDeImeifVdROEkljGJa88WcZSsUn*w*USQQQdTTXF*ZP86A9CMNGD2GABF--8BNEDBSGQIM4555555AA666669MIFOQJHPMNIMWVcmCBDsEZVddTUZMPKNMEHFKGSWMauyyLGNFGGGEIHHFFNKOEChc8OVi********r*******ummop***Vem*wegmooono**XXXYXYWTXXYYXXWSXSRTtlUbrvcNdWknlNOz*TSOUeccfghhmyrptsttlomolfmqknmccbaaddbecbaasilgfgkkmid*o*********a*dk*xxSeec*ecqrngcLA**eXNRbYKLgYhbITWKCKKIICHGGGGSH***RNXxyu*oqsppslujnp*-RTsQNuWn**H9*************xCDFlw*olnp*mvLKLLLLLLaKOCGTKh655465557769589B7797697787596D8AE7Bh**itq**v*wgdefcrr**nkllWouw*of*c8CadXmPRTTsc*q**QcS9MCHVGDEEDFDDMJIOLQPgxGWNaSHLiMMPDTOPKIMTILEIHFadHeGFFHBDDDFED878888888FHCDDBAednJXGMDNFoHKMMIIKLLLLOHNSPQRO4-BBKGA222222vf*tNrZgkkmhmjmef-jeggjghgghkmkcdfcddz****edWZcWXXaZZZYYWZWXZ*bZXccccK4qtwvzwutsxzx24CA57555IJJJ99tW*RPQSYSELNKKOKMZIJKIJCKEJNZTZdccjuqzcfnaeVyy*ABCABCCBBGZecobcccbnnqjmIIHCFDBEEF99A943ENJJCDCE67656757*6TC987B-79B6DC8EGE9BF979999OVnOIXoYeT5OH 5677XRI-UE86QVUKORJMSWSfVjQHIDFEFTVQHPONNKKEEGVOSgaZieOMVMMLKMGFE8AB2HB5CBGCC2CD8EECIG69-YjDOSSPHIILEBJQPI6H*e*afTnetOIKLKTIikLwI**k1rSwKKKIcLO*aGLLMETIG*JVMThMi*LnSQQnQb*qk*bEIGF*899IGqhh*IvzFK*jopV ------------------------------------------------------------------------------------------------------------------------------1------------------------------------------------ DISOP:02AL 314-327,574-578| PSIPRED cHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccEEEEEEEEEEEEcccccccEEEccEEEEccccEEEEEccccccHHHHHHHHHHcccccccEEEEccEEcHHccHHHHHHHccccccccccccccHHHHHHcccccccHHHHHHHHHHcccHHHHHHccHHcccccccccccccHHHHHHHHHHHHHHccccEEEEHHHHHHHHHHHHHHHHHHHHHHHHHcccEEEEEEccHHHHHcccEEEEEEccEEEEEccHHHHHHcccHHHHHHHHHHHcccc //