[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Lactobacillus salivarius UCC118 (lsal0)
Gene : ABD99094.1
DDBJ      :             Phage Terminase Small Subunit
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  14/915 : Eukaryota  0/199 : Viruses  11/175   --->[See Alignment]
:157 amino acids
:PSIPRED
:DISOPRED
:RPS:PFM   30->139 PF05119 * Terminase_4 4e-12 37.6 %
:HMM:PFM   26->138 PF05119 * Terminase_4 4.8e-31 33.3 99/100  
:BLT:SWISS 22->95 PYRG_NITMU 8e-04 34.7 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABD99094.1 GT:GENE ABD99094.1 GT:PRODUCT Phage Terminase Small Subunit GT:DATABASE GIB00337CH01 GT:ORG lsal0 GB:ACCESSION GIB00337CH01 GB:LOCATION 308767..309240 GB:FROM 308767 GB:TO 309240 GB:DIRECTION + GB:PRODUCT Phage Terminase Small Subunit GB:NOTE COG3728 [L] Phage terminase, small subunit GB:PROTEIN_ID ABD99094.1 GB:DB_XREF GI:90820455 LENGTH 157 SQ:AASEQ MVKKVFYQQNDGSLSGTPPKHLGTVAKACWRKIVPFLESTERVKRIDTALVELYCSQYEIYRQAYDDVLENGIQTKIFKSLQDASGSIVGKDFVGYRKNPAVATMKDASVQITSIGSQLGLSPKARAELMQLADSKGKEDSKEDSTEKLAKIFGGES GT:EXON 1|1-157:0| BL:SWS:NREP 1 BL:SWS:REP 22->95|PYRG_NITMU|8e-04|34.7|72/100| RP:PFM:NREP 1 RP:PFM:REP 30->139|PF05119|4e-12|37.6|93/99|Terminase_4| HM:PFM:NREP 1 HM:PFM:REP 26->138|PF05119|4.8e-31|33.3|99/100|Terminase_4| OP:NHOMO 27 OP:NHOMOORG 25 OP:PATTERN -------------------------------------------------------------------- ------------------------------------1-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1---21111--1111-2-1--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------11---1--------------1------1-----------------11-11-----------------1-1---------------------- DISOP:02AL 1-15,129-146,157-158| PSIPRED cccccccccccccccccccHHHcHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccEEEEccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHcccccccccccHHHHHHHHHcccc //