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Lactobacillus salivarius UCC118 (lsal0)
Gene : ABD99125.1
DDBJ      :             Transposase ISLasa4c, ISL3 family
Swiss-Prot:             

Homologs  Archaea  2/68 : Bacteria  128/915 : Eukaryota  0/199 : Viruses  1/175   --->[See Alignment]
b.82.1
:429 amino acids
:PSIPRED
:DISOPRED
:RPS:SCOP  215->256 1xsqA  b.82.1.14 * 1e-04 19.0 %
:RPS:PFM   163->264 PF01610 * Transposase_12 6e-12 32.0 %
:HMM:PFM   162->263 PF01610 * Transposase_12 2.1e-24 28.3 99/100  
:BLT:SWISS 306->426 ADPR_LACLA 7e-17 37.0 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABD99125.1 GT:GENE ABD99125.1 GT:PRODUCT Transposase ISLasa4c, ISL3 family GT:DATABASE GIB00337CH01 GT:ORG lsal0 GB:ACCESSION GIB00337CH01 GB:LOCATION complement(340699..341988) GB:FROM 340699 GB:TO 341988 GB:DIRECTION - GB:PRODUCT Transposase ISLasa4c, ISL3 family GB:NOTE COG0675 [L] Transposase and inactivated derivatives GB:PROTEIN_ID ABD99125.1 GB:DB_XREF GI:90820486 LENGTH 429 SQ:AASEQ MDNNIKLLLGITDPNLTIDPKYQYTSYIEEKIIKNSKTLLCHLYLSYPMYCPNCKALMLHNGTKVANNVHLSSAGKKLVLSIRKQKYLCPECKKTATAKFKDTNYHDHFSNAVKAKLVRDLSLSRPMCEIAADSFTSSNTIIRSLESVENNFKVNRNWLPSHLSLDDFKSGKRFSSSGMSMCLINAVNHRIIDIIPERNNKFLRNYFIQYSYKARLSVMTITVDLYAPYRSLIKKLFPNAFIIADKFHVVAQAYTAMNKIRTRVMKEYGAGTHEYRALKRFWKLLLKNQDNVDYHRYYPRINFKYAELSDSEVLDRLSDMSSELKTAYEYYQLLLQMYRKNSCQSLNLLIDTSSWNLPPEMRQALKTIKKHKAEIENSFVLPRLTNGPIEGINNHIKVIKRIAYGYNNFKHFRLRILLSLKNNVIFFST GT:EXON 1|1-429:0| BL:SWS:NREP 1 BL:SWS:REP 306->426|ADPR_LACLA|7e-17|37.0|119/310| RP:PFM:NREP 1 RP:PFM:REP 163->264|PF01610|6e-12|32.0|97/100|Transposase_12| HM:PFM:NREP 1 HM:PFM:REP 162->263|PF01610|2.1e-24|28.3|99/100|Transposase_12| GO:PFM:NREP 3 GO:PFM GO:0003677|"GO:DNA binding"|PF01610|IPR002560| GO:PFM GO:0004803|"GO:transposase activity"|PF01610|IPR002560| GO:PFM GO:0006313|"GO:transposition, DNA-mediated"|PF01610|IPR002560| RP:SCP:NREP 1 RP:SCP:REP 215->256|1xsqA|1e-04|19.0|42/154|b.82.1.14| OP:NHOMO 697 OP:NHOMOORG 131 OP:PATTERN -------------------------------------------------22----------------- --------34------------------------------------1A--------5-----------------------1------------------------------------------------------------------44-5-S---------------53----------------------1-----------------e-------933-8-----------A8---262288A221--X---3-92181R5-A62---H---2---2--1455-21891E779B1F-------11----11119CJ111--1---------------------B----1-------1-------4---3---1-------------------------------------------------------------------------11111111--------------------------------------1----------------ECDA----532-65--7----------------5------------------------------A-1---------12P----------8--------------------------------1--2-----1--------3----2--------1-------------------------------------------2-----1------------------------------------------------1675-2--------1---------2---21------------------1-----------------------1----1--------1--------------------------------------------------8------------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------1------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 1-1,266-276| PSIPRED cccHHHHHccccccccEEEcccccccEEEEEEEccEEEEEEEEEccccccccccccEEEEccEEEEEEEEEccccEEEEEEEEEEEEEEccccccEEEEcccccccccccHHHHHHHHHHHHccccHHHHHHHHcccHHHHHHHHHHHHHHHcccccccccEEEEEEEEcccccccccEEEEEEEcccccEEEEEccccHHHHHHHHHHccHHHcccEEEEEEEccHHHHHHHHHHccccEEEEcHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHccccHHHHHcccccccHHHHHHccHHHcccHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHcccHHHHHHHHHHHHcHHHHHHHHHccccccccccHHHHHHHHHHHHccccccHHHHHHHHHHHccccEEEEEc //