[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Lactobacillus salivarius UCC118 (lsal0)
Gene : ABD99129.1
DDBJ      :             Macrolide-efflux protein
Swiss-Prot:             

Homologs  Archaea  3/68 : Bacteria  31/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
f.38.1
:405 amino acids
:PSIPRED
:DISOPRED
:RPS:SCOP  255->379 1pw4A  f.38.1.1 * 4e-04 12.8 %
:HMM:SCOP  1->402 1pv7A_ f.38.1.2 * 3.5e-39 20.3 %
:RPS:PFM   5->369 PF05977 * DUF894 7e-05 21.7 %
:HMM:PFM   17->297 PF07690 * MFS_1 1.1e-19 20.0 270/353  
:HMM:PFM   223->400 PF07690 * MFS_1 5.5e-14 23.3 172/353  
:BLT:SWISS 3->91 BMR2_BACSU 9e-04 26.4 %
:BLT:SWISS 212->365 TCRB_BACSU 6e-06 28.8 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABD99129.1 GT:GENE ABD99129.1 GT:PRODUCT Macrolide-efflux protein GT:DATABASE GIB00337CH01 GT:ORG lsal0 GB:ACCESSION GIB00337CH01 GB:LOCATION 345168..346385 GB:FROM 345168 GB:TO 346385 GB:DIRECTION + GB:PRODUCT Macrolide-efflux protein GB:NOTE COG0477 [GEPR] Permeases of the major facilitator superfamily GB:PROTEIN_ID ABD99129.1 GB:DB_XREF GI:90820490 LENGTH 405 SQ:AASEQ MGDKRSNLFQLLKAGTTTIINALGAAIFTYALSLKLLEITGSALGYGVNIFIGPIIGLILSPVISKVVDKYPRKNVAIVAEIALVICLTIFLIIYPLAVKTNLLVVSVVFVSISNICARFFSISYLSSTPDIVSKDYLQKLNAIQTTGVAIAGIAALPLAGYIYGKIAFEYIILIEIITEILTIFLTVITKFKAHRNEEKAHETGKKLIEILRGNMELTRLTMIAMLLNLAVTSLTIGVPYVVIHVLKYSSVVSGDIQSLYSIGVVLGGAVIAAINIKNITRFIIRLYSSFAVALLILGISLSFFKHETLIIFIVFELILGISTALSDPPLFTYVQEVIPKENLGKVMTFLYTLAQLLTPVGVLIYSTLFAKIDYPTVFLISGIVVNIIVIVVLLFLGKKSKNLA GT:EXON 1|1-405:0| BL:SWS:NREP 2 BL:SWS:REP 3->91|BMR2_BACSU|9e-04|26.4|87/400| BL:SWS:REP 212->365|TCRB_BACSU|6e-06|28.8|146/458| TM:NTM 11 TM:REGION 18->40| TM:REGION 47->69| TM:REGION 75->97| TM:REGION 103->125| TM:REGION 142->164| TM:REGION 169->191| TM:REGION 221->243| TM:REGION 254->276| TM:REGION 294->316| TM:REGION 347->369| TM:REGION 376->398| SEG 105->114|vvsvvfvsis| SEG 150->161|aiagiaalplag| SEG 170->190|eyiilieiiteiltifltvit| SEG 380->397|lisgivvniivivvllfl| RP:PFM:NREP 1 RP:PFM:REP 5->369|PF05977|7e-05|21.7|351/402|DUF894| HM:PFM:NREP 2 HM:PFM:REP 17->297|PF07690|1.1e-19|20.0|270/353|MFS_1| HM:PFM:REP 223->400|PF07690|5.5e-14|23.3|172/353|MFS_1| RP:SCP:NREP 1 RP:SCP:REP 255->379|1pw4A|4e-04|12.8|125/434|f.38.1.1| HM:SCP:REP 1->402|1pv7A_|3.5e-39|20.3|390/417|f.38.1.2|1/1|MFS general substrate transporter| OP:NHOMO 42 OP:NHOMOORG 34 OP:PATTERN ------------------------------------------------------2-1--1-------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------111111121132113------111---2-----------1--------------1---------------11--11-1--------------1-------------------------------------11-1----------------------------------1------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 1-4,192-206,402-406| PSIPRED cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHcccccccc //