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Lactobacillus salivarius UCC118 (lsal0)
Gene : ABD99188.1
DDBJ      :             Hypothetical secreted protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  1/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
:257 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   121->189 1p35B PDBj 3e-04 35.8 %
:HMM:PFM   48->157 PF02190 * LON 7.7e-05 21.8 87/207  
:HMM:PFM   181->247 PF11611 * TRF2 0.00035 20.9 67/123  
:BLT:SWISS 71->190 PBPA_CLOBL 7e-04 30.7 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABD99188.1 GT:GENE ABD99188.1 GT:PRODUCT Hypothetical secreted protein GT:DATABASE GIB00337CH01 GT:ORG lsal0 GB:ACCESSION GIB00337CH01 GB:LOCATION 407319..408092 GB:FROM 407319 GB:TO 408092 GB:DIRECTION + GB:PRODUCT Hypothetical secreted protein GB:PROTEIN_ID ABD99188.1 GB:DB_XREF GI:90820549 LENGTH 257 SQ:AASEQ MRSKILKSLAVITCFAMTILVLVGCSKADKDGYYDNAFMTALEKGLVARWKISDKEDSKSSYKKAVQAELDSVEEYQDKKFKNTQLKAAALDYINGLKEQKSVLKYWGADDFDERWSAAYDKRTAALVAINKIHKIKVSEKQDNLSELLGNGKSVNEKENLKKKIDAMLAKAKVERDDSEDLDGEYVNIIIKNNTGKDYSFLTATVKFKDKDGVVVDSQDVTAEGLADGETTRLRPYVETKDWETYQLVLNSYELKK GT:EXON 1|1-257:0| BL:SWS:NREP 1 BL:SWS:REP 71->190|PBPA_CLOBL|7e-04|30.7|114/827| TM:NTM 1 TM:REGION 4->26| SEG 51->64|kisdkedskssykk| SEG 206->217|vkfkdkdgvvvd| BL:PDB:NREP 1 BL:PDB:REP 121->189|1p35B|3e-04|35.8|67/298| HM:PFM:NREP 2 HM:PFM:REP 48->157|PF02190|7.7e-05|21.8|87/207|LON| HM:PFM:REP 181->247|PF11611|0.00035|20.9|67/123|TRF2| OP:NHOMO 1 OP:NHOMOORG 1 OP:PATTERN -------------------------------------------------------------------- -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 67 STR:RPRED 26.1 SQ:SECSTR ########################################################################################################################ETTEEEEEEEEccccccccccEEEEEEEcccEEEEccccTHHHHHHHHH##HTTccccccccccccccc#################################################################### DISOP:02AL 1-5,53-67,152-152,154-154,158-159,256-258| PSIPRED cHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHccEEEEEEcccccHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHccccEEEEEEEEEEEEEcHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHcccccccccccEEEEEEEccccccEEEEEEEEEEEccccEEEEcccccHHHcccccccEEEcccccccccEEEEEEccccccc //