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Lactobacillus salivarius UCC118 (lsal0)
Gene : ABD99243.1
DDBJ      :             Amino acid permease
Swiss-Prot:             

Homologs  Archaea  1/68 : Bacteria  425/915 : Eukaryota  99/199 : Viruses  0/175   --->[See Alignment]
:452 amino acids
:PSIPRED
:DISOPRED
:RPS:PFM   41->423 PF00324 * AA_permease 3e-27 30.3 %
:HMM:PFM   16->447 PF00324 * AA_permease 1.5e-102 38.6 428/479  
:BLT:SWISS 1->450 YDGF_BACSU e-104 50.7 %
:PROS 41->71|PS00218|AMINO_ACID_PERMEASE_1
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABD99243.1 GT:GENE ABD99243.1 GT:PRODUCT Amino acid permease GT:DATABASE GIB00337CH01 GT:ORG lsal0 GB:ACCESSION GIB00337CH01 GB:LOCATION 473536..474894 GB:FROM 473536 GB:TO 474894 GB:DIRECTION + GB:PRODUCT Amino acid permease GB:NOTE COG1113 [E] Gamma-aminobutyrate permease and related permeases GB:PROTEIN_ID ABD99243.1 GB:DB_XREF GI:90820604 LENGTH 452 SQ:AASEQ MNKENKGYARNLKSRHIQLIALGGTIGTGLFLGSGKSIHLAGPSIVLAYCITGLICFFLMRAMGELLLSDLNTHSFIDFITKYLGEKIGFIAGWTYWICWITIAMADVTATGLYIEYWFPNIPQWVPGLVAVVVLLSLNLVTVGLFGETEFWFSLIKIIAIIALIVSGIAMVIVSYKTPVGHATLGNLYSYGGLFPKGLKGFLLSFQMVTFGFIGIEMVGITASEAENPKKVIPKAINEIPLRIIIFYVGSLLAIMSIYPWNSISINESPFVQVFQNIGITFAAGIINFVVLTAALSATNSALFSTGRMLFSLNWGKKGKFAKKMSTLSRQQVPANGLIFSAIIIAIAVLANFVVSNTSLFTFVSSVATTCFLFIWGAIVVCHLEFKKQQKKQNIPEGEFKLHFHPWTDYLVLAFLIFVGVIMCLEKTTLFALIAAIAWFVMLYMISSIKGK GT:EXON 1|1-452:0| BL:SWS:NREP 1 BL:SWS:REP 1->450|YDGF_BACSU|e-104|50.7|446/458| PROS 41->71|PS00218|AMINO_ACID_PERMEASE_1|PDOC00191| TM:NTM 10 TM:REGION 42->64| TM:REGION 83->105| TM:REGION 125->147| TM:REGION 154->176| TM:REGION 202->224| TM:REGION 238->260| TM:REGION 275->297| TM:REGION 334->356| TM:REGION 363->384| TM:REGION 417->439| SEG 19->35|lialggtigtglflgsg| SEG 129->145|lvavvvllslnlvtvgl| SEG 155->165|likiiaiiali| SEG 192->204|gglfpkglkgfll| SEG 292->306|ltaalsatnsalfst| RP:PFM:NREP 1 RP:PFM:REP 41->423|PF00324|3e-27|30.3|366/429|AA_permease| HM:PFM:NREP 1 HM:PFM:REP 16->447|PF00324|1.5e-102|38.6|428/479|AA_permease| GO:PFM:NREP 3 GO:PFM GO:0006810|"GO:transport"|PF00324|IPR004841| GO:PFM GO:0016020|"GO:membrane"|PF00324|IPR004841| GO:PFM GO:0055085|"GO:transmembrane transport"|PF00324|IPR004841| OP:NHOMO 2913 OP:NHOMOORG 525 OP:PATTERN -----------------------------------------------1-------------------- ----142333423251144-412253444443-11117DC----2-21122287A724-----A119544-4222444-----------------------1-----------------------------------------------------------------------------------------3-97777778868A788911557B8874358-712222226155555555555555466667144243274456666432536417772221111-22-----------1111111111111-212221111---44111111111---441111----------2212--1-11----------1---34334-------------1-111111112------2------111-111--1--1--------------44444444-221------------------------------------1--211-18BBBB836564AA33888848D825555-1332--1--7----1-------31---------------------3--------------------------1-------1-1112111-------111----------------------1---11------------87676859888988888-88A8888878888888888CCC797749899999999999899B88877784-888788788888--3------1111--------------------FFGFDA8-----88789A49-DHDB1333233333333---------------2233333222--------------------------------------------------------------- ------------322AC759BBABECF766656BB96777688777DFDEGLQM9AD56999CEL8B93CA7HBGBB7CB6EDDGEB7-4D2C4686353836779----------------------------------------------------2-----------4--------------1--17----1---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 1-6,8-11| PSIPRED cccccccccccccccEEEEEEEcccHHHHHHHcccHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHcccccccHHHEEEHHHHHHHHccHHHHHHHHHHHHHHccccccccHHHHHcccccccHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHccc //