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Lactobacillus salivarius UCC118 (lsal0)
Gene : ABD99335.1
DDBJ      :             Hydroxymethylglutaryl-CoA synthase
Swiss-Prot:             

Homologs  Archaea  42/68 : Bacteria  156/915 : Eukaryota  175/199 : Viruses  0/175   --->[See Alignment]
c.95.1
:387 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   1->385 1yslB PDBj 5e-95 46.6 %
:RPS:PDB   16->316 1b65A PDBj 4e-20 8.8 %
:RPS:SCOP  3->166 1tvzA1  c.95.1.2 * 2e-33 56.7 %
:RPS:SCOP  168->386 1tvzA2  c.95.1.2 * 2e-23 31.0 %
:HMM:SCOP  2->167 1tvzA1 c.95.1.2 * 3.3e-43 34.3 %
:HMM:SCOP  168->387 1tvzA2 c.95.1.2 * 8.4e-62 42.5 %
:RPS:PFM   1->166 PF01154 * HMG_CoA_synt_N 7e-41 53.9 %
:RPS:PFM   183->349 PF08540 * HMG_CoA_synt_C 1e-13 34.5 %
:HMM:PFM   180->244 PF08540 * HMG_CoA_synt_C 1.1e-10 38.5 65/282  
:HMM:PFM   259->350 PF08540 * HMG_CoA_synt_C 5e-17 38.5 91/282  
:HMM:PFM   2->165 PF01154 * HMG_CoA_synt_N 2.4e-23 33.1 163/174  
:BLT:SWISS 4->384 PKSG_BACSU 7e-32 31.0 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABD99335.1 GT:GENE ABD99335.1 GT:PRODUCT Hydroxymethylglutaryl-CoA synthase GT:DATABASE GIB00337CH01 GT:ORG lsal0 GB:ACCESSION GIB00337CH01 GB:LOCATION 571364..572527 GB:FROM 571364 GB:TO 572527 GB:DIRECTION + GB:PRODUCT Hydroxymethylglutaryl-CoA synthase GB:NOTE COG3425 [I] 3-hydroxy-3-methylglutaryl CoA synthase GB:PROTEIN_ID ABD99335.1 GB:DB_XREF GI:90820696 LENGTH 387 SQ:AASEQ MDIGIDKINFFTSNLYVDMTELAIARNEDPDKYLIGIGQSKMAVIPPTQDIVTMGANAAESMLTDEDKEDIDLVIVGTESGIDNSKSAAAYIADLLGLRDDIRTFEIKQACYGATAALQMAKAQVTLNPDSKALIIGADIAKYGLNTPGEVTQGGGAVAMLVSANPKLLSFEGGSTYLSRNIMDFWRPLGHSEALVDGKYSSNVYLDFFNNVYSNYKDKTGFTIDNFEALLFHLPYTKMGLKALREAQKDADAKVSAKLAHRFEDSRLYNRQVGNLYTGSLYLSLLSLLENNDDLKSGDRLGLFSYGSGAQGEFFAMLLRKDYRKYLMNTTNEFLQKRTCISVEEYEKIYLKSLHYENNSELDLDMDDAQFVLTGIKENQRQYKNRI GT:EXON 1|1-387:0| BL:SWS:NREP 1 BL:SWS:REP 4->384|PKSG_BACSU|7e-32|31.0|378/420| SEG 274->295|gnlytgslylsllsllennddl| BL:PDB:NREP 1 BL:PDB:REP 1->385|1yslB|5e-95|46.6|382/383| RP:PDB:NREP 1 RP:PDB:REP 16->316|1b65A|4e-20|8.8|284/363| RP:PFM:NREP 2 RP:PFM:REP 1->166|PF01154|7e-41|53.9|165/173|HMG_CoA_synt_N| RP:PFM:REP 183->349|PF08540|1e-13|34.5|165/238|HMG_CoA_synt_C| HM:PFM:NREP 3 HM:PFM:REP 180->244|PF08540|1.1e-10|38.5|65/282|HMG_CoA_synt_C| HM:PFM:REP 259->350|PF08540|5e-17|38.5|91/282|HMG_CoA_synt_C| HM:PFM:REP 2->165|PF01154|2.4e-23|33.1|163/174|HMG_CoA_synt_N| GO:PFM:NREP 4 GO:PFM GO:0004421|"GO:hydroxymethylglutaryl-CoA synthase activity"|PF01154|IPR013528| GO:PFM GO:0008299|"GO:isoprenoid biosynthetic process"|PF01154|IPR013528| GO:PFM GO:0004421|"GO:hydroxymethylglutaryl-CoA synthase activity"|PF08540|IPR013746| GO:PFM GO:0008299|"GO:isoprenoid biosynthetic process"|PF08540|IPR013746| RP:SCP:NREP 2 RP:SCP:REP 3->166|1tvzA1|2e-33|56.7|164/166|c.95.1.2| RP:SCP:REP 168->386|1tvzA2|2e-23|31.0|216/221|c.95.1.2| HM:SCP:REP 2->167|1tvzA1|3.3e-43|34.3|166/0|c.95.1.2|1/1|Thiolase-like| HM:SCP:REP 168->387|1tvzA2|8.4e-62|42.5|219/0|c.95.1.2|1/1|Thiolase-like| OP:NHOMO 469 OP:NHOMOORG 373 OP:PATTERN 1111111111111111--------11111111-11111------------111-1111-1-111--11 ----2-------1-----------1-----------1-----------------------------1----------------------------------1---1-------------------------------------------1-------------------1-----------------------2--------------------1-------1--111111---11111111111111111111111111111111111111111111111111111111111111111111111111111111111111111-------------------------------------------------1------------------------------------------1-----1------------------------------------------------------------------------------------------1-------1111-1-------------------------------------------------------------------------32-------------------------------------------------------------1-----------11-1-----------------------------------11--1-1----------1--------------11111111111-----1------------1111-------1--1-----------------1--------------------1--------------------------------------11111111--1-------------------------------------- ----221-21111111111122222211111--23211-1-111112211112111111111111111-1111111111111111111-12111132221111111114121111-2112222142-4-383-22322114113211222221123221111111-151141111--------1123431221112111 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 385 STR:RPRED 99.5 SQ:SECSTR ccEEEEEEEEEcccEccTTccGGGcTTcEEEEEEEEcccccTTcccccEEEEEEEETTTTccccccEEEEEEEEcccccccHHcHHHHHcEEcccEEEEEGGGHHHEcHHHHHHHHHHHHTHHHHccccccccccEEEEEccTTTccGGGHHHHHHHHHTcccccccccccGGGTTcEETTEEcEEEEEEEEEEEEEEccccGGGcccTTccHHHHHccTTcHHHHccEEEEEEEccccHHHHHHHHTccGcHHHHHHHHHTHHHHHHTTTccccTTcEEEEEEEEcccccccGGGccccccccccccGGGHHHHHEEEETTGGGcccHHHHHHHHTcEEccHHHHHHHHHccccTTccEEccTGGcccTTcEEEEETTEEEEcc## PSIPRED ccEEEEEEEEEcccEEEcHHHHHHHHcccHHHHHHHHcEEEEEcccccccHHHHHHHHHHHHHHcccHHHccEEEEEccccccccccHHHHHHHHHcccccEEEEEEccHHHHHHHHHHHHHHHHHHccccEEEEEEEcHHHHcccccccccccccEEEEEEcccccEEEEEcccccccccccHHHccccccccEEcccHHHHHHHHHHHHHHHHHHHHHcccHHHccEEEEccccHHHHHHHHHHHccccHHHHHHHHHHHcccHHcccccccccccHHHHHHHHHHHccccccccccEEEEEEEcccccEEEEEEEEcccHHHHHHHHHHHHHHccccccHHHHHHHHHHccccccccccccccccccEEEEEccccEEEHHccc //