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Lactobacillus salivarius UCC118 (lsal0)
Gene : ABD99445.1
DDBJ      :             Amino acid permease
Swiss-Prot:             

Homologs  Archaea  20/68 : Bacteria  429/915 : Eukaryota  98/199 : Viruses  0/175   --->[See Alignment]
:476 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   34->408 3gi9C PDBj 9e-10 23.7 %
:RPS:PFM   38->462 PF00324 * AA_permease 1e-19 28.9 %
:HMM:PFM   41->466 PF00324 * AA_permease 4.6e-37 24.5 412/479  
:BLT:SWISS 84->475 YHDG_BACSU 3e-55 31.7 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABD99445.1 GT:GENE ABD99445.1 GT:PRODUCT Amino acid permease GT:DATABASE GIB00337CH01 GT:ORG lsal0 GB:ACCESSION GIB00337CH01 GB:LOCATION 678692..680122 GB:FROM 678692 GB:TO 680122 GB:DIRECTION + GB:PRODUCT Amino acid permease GB:NOTE COG0531 [E] Amino acid transporters GB:PROTEIN_ID ABD99445.1 GB:DB_XREF GI:90820806 LENGTH 476 SQ:AASEQ MNKKTFWKKITQKQNPKLYAAKDSKLIPSLRTLDLIGLGTGMVVGTAIFTLPGIVAAEYTGPAVPLAFIIGAIGAGLSALAYAEMASVLPFAGSAFSWISVLFGEFFGWIAGWALLAEYFISVAFVASGWSAYMQGFLKSMGIYLPVALSGGFNPNTGQIFDALAAFAILLVTVLLSKGVKQVARIENGIVMLKLIVIIIFIAVGATAIHPDNYVPFIPAHKAGTHFGGLTGILAGASQIFIAYVGFDAIAANTAETINPQKTMPKGLLGTLFLGTGFFVLVSLVLVGMFKYSIYAGNAEPAAFALRKAGHYFTANLLSLVAIIGIFSALIGILLASSRLIYSFGRDGLLSSKLGKINTKHVPKNALWSISLGALILASFFPFDFLATLVSAGTLVAFIFVSIGIYALRKREGIDLPEAKFKMPGYPLLPAISALVSIIIFWNLNIDAKLLMLVWFIIGIVIYFVYGMHHSNLNKK GT:EXON 1|1-476:0| BL:SWS:NREP 1 BL:SWS:REP 84->475|YHDG_BACSU|3e-55|31.7|382/465| TM:NTM 12 TM:REGION 33->55| TM:REGION 61->83| TM:REGION 86->108| TM:REGION 111->133| TM:REGION 158->180| TM:REGION 186->208| TM:REGION 226->248| TM:REGION 268->290| TM:REGION 315->337| TM:REGION 375->397| TM:REGION 423->445| TM:REGION 448->470| SEG 66->83|lafiigaigaglsalaya| SEG 160->171|ifdalaafaill| SEG 267->288|gllgtlflgtgffvlvslvlvg| BL:PDB:NREP 1 BL:PDB:REP 34->408|3gi9C|9e-10|23.7|337/437| RP:PFM:NREP 1 RP:PFM:REP 38->462|PF00324|1e-19|28.9|405/429|AA_permease| HM:PFM:NREP 1 HM:PFM:REP 41->466|PF00324|4.6e-37|24.5|412/479|AA_permease| GO:PFM:NREP 3 GO:PFM GO:0006810|"GO:transport"|PF00324|IPR004841| GO:PFM GO:0016020|"GO:membrane"|PF00324|IPR004841| GO:PFM GO:0055085|"GO:transmembrane transport"|PF00324|IPR004841| OP:NHOMO 1532 OP:NHOMOORG 547 OP:PATTERN ------1---------12------11112111--1--------3--1---111----1-1-2------ 242-1---------32222-21--3322222211112587----11---22-655--2----2123A64312222222--112-1-1111-111-----2-231-42322----------------1111--11--------------------------------1-----------------------1328777777886677A88--114988744321612222234222222222222222212233354-33-345377662245543322211121112221111111111122222222222222222222221---42111111111--233111--1------11--11--1--3--31---4--2222-1--111------11-------------1-33133132-------------------1-----------2222222212222-------------111111111111111-----11223-11--2333322212222313323125312431-1112-----1---------11131-------111-------------------------1------1------------------1----------111-------1-------------------1--1---------111242-1---1--------1----2-----------21223-121-111111111111111---------111-11111111--1------11111--2----------------4434312----11121231--5545-111------------------------33333333353333----22--------------------------------------------------1-- ----32----1-651---------------------------------1111-1-------------------------------------------------112----6AF6AA73433463BA474AL6-6592533D44B624433C539466764Db31432A35G3361121--11112668D-96137567- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 347 STR:RPRED 72.9 SQ:SECSTR #################################HHHHHHHHHHHHHHTTTTHH#HHHHHTGGGHHHHHHHHHHHHHHHHHHHHHHTTTcccTTTHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTccccHTTcccccHHH######HHHHHHHHHHHHHHHTTTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTcccHHHHcccccH#######HHHHHHHHHHHHTTGGGTHHHHHHTTGGGcccHHHHHHH#############HHHHHHHHHHHHHHHHHHHHHTcTTHHHHHTHHHHcHHHHHHHHHHHHHHHHHHHTTTHHHHHHHHHHccccccccT#TcccccTHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHT#################################################################### DISOP:02AL 1-3,8-30,473-477| PSIPRED ccHHHHHHHHcccccccccccccccEEEcccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHcHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHccccccccHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHccccc //