[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Lactobacillus salivarius UCC118 (lsal0)
Gene : ABD99486.1
DDBJ      :             Hydrolase, HAD superfamily
Swiss-Prot:             

Homologs  Archaea  17/68 : Bacteria  309/915 : Eukaryota  16/199 : Viruses  0/175   --->[See Alignment]
c.108.1
:229 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   29->228 3i76C PDBj 4e-44 41.4 %
:RPS:PDB   18->229 3ed5A PDBj 1e-25 37.1 %
:RPS:SCOP  41->228 2gfhA1  c.108.1.6 * 1e-26 24.9 %
:HMM:SCOP  1->226 1vj5A1 c.108.1.2 * 1.3e-44 30.0 %
:HMM:PFM   4->191 PF00702 * Hydrolase 1.6e-19 22.1 172/192  
:BLT:SWISS 29->228 YFNB_BACSU 1e-43 41.4 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABD99486.1 GT:GENE ABD99486.1 GT:PRODUCT Hydrolase, HAD superfamily GT:DATABASE GIB00337CH01 GT:ORG lsal0 GB:ACCESSION GIB00337CH01 GB:LOCATION complement(723930..724619) GB:FROM 723930 GB:TO 724619 GB:DIRECTION - GB:PRODUCT Hydrolase, HAD superfamily GB:NOTE COG1011 [R] Predicted hydrolase (HAD superfamily) GB:PROTEIN_ID ABD99486.1 GB:DB_XREF GI:90820847 LENGTH 229 SQ:AASEQ MSYSTLLFDIDDTLLDFHATENRALELLFEKHGIELTDTVKDNYVKFNQSLWKKLELGEISRQELMTNRFTTFFKKEFDLNIDGLSLNREYLEFLSTGTDTIPGAKDLLSTLKKSGHKLYVVTNGIDFVQERRLRNTGFNSFFDDIFISQKIGYQKPDARFFKNVFNELSEFNPDDTLIVGDSLTSDIQGGHNANIDSIWYNPKLSPIDKKITPTYQVSNLQDILQIVG GT:EXON 1|1-229:0| BL:SWS:NREP 1 BL:SWS:REP 29->228|YFNB_BACSU|1e-43|41.4|198/235| SEG 5->17|tllfdiddtlldf| BL:PDB:NREP 1 BL:PDB:REP 29->228|3i76C|4e-44|41.4|198/228| RP:PDB:NREP 1 RP:PDB:REP 18->229|3ed5A|1e-25|37.1|205/226| HM:PFM:NREP 1 HM:PFM:REP 4->191|PF00702|1.6e-19|22.1|172/192|Hydrolase| RP:SCP:NREP 1 RP:SCP:REP 41->228|2gfhA1|1e-26|24.9|185/243|c.108.1.6| HM:SCP:REP 1->226|1vj5A1|1.3e-44|30.0|220/226|c.108.1.2|1/1|HAD-like| OP:NHOMO 421 OP:NHOMOORG 342 OP:PATTERN ------------------------111--1--111111---------------1212222-------- ----1--------------------------------------------------------1----11--------------------1111-111---1-111111111-----------------------------1-----11--------------------1-1----------------11-----23333333314323332222123331-1211111111126111111111111111122212211111-11111--111111--22211121111221111111111121111211111111112222112--1-21111221-1--2---11121-1-1----11----1---------1-1---------------------------------------1-------------------------------------------------------------------------------1----------------------------------------------------------------------------1---------------------1------------------------------------111------1-1111111111111111111-------------11--1111111111111-111111111111111111111111---1111111111111111-1111111--111111111111-----------------1111--11----1--1--1------------------------------------11111111132111----------------------------------1--------------------------111111111--- -------------------------------------------------11-21--------------------------------------------1-------------1111--11---------------------------------1----1------1------------------11------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 212 STR:RPRED 92.6 SQ:SECSTR #################HHHHHHHHHHHHHHTTccccHHcGHHHHHHHHHHHHHHHHTTccHHHHHHHHHHHHHHHTTHccccHHHHHHHHHHHHTTcccccTTHHHHHHHHHTTTcEEEEEEcccHHHHHHHHHHTTcGGGccEEEEGGGTTccTTHHHHHHHHHTcTcTccGGGEEEEEccTTTTHHHHHHTTcEEEEcTTcccTHHTcccccEEEccGGGHHHHHT DISOP:02AL 1-1| PSIPRED ccccEEEEEcccHHHccHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHcccccccHHHHHHHHHHcccEEEEEEcccHHHHHHHHHHcccHHHccEEEEEHHcccccccHHHHHHHHHHHccccHHHEEEEEccHHHHHHHHHHcccEEEEEccccccccccccccEEEccHHHHHHHcc //