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Lactobacillus salivarius UCC118 (lsal0)
Gene : ABD99500.1
DDBJ      :             DNA replication protein dnaD
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  134/915 : Eukaryota  0/199 : Viruses  1/175   --->[See Alignment]
a.275.1
:235 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   11->105 2v79B PDBj 2e-09 30.5 %
:BLT:PDB   132->199 2zc2A PDBj 3e-09 43.3 %
:RPS:SCOP  128->194 2i5uA1  a.275.1.1 * 8e-13 25.4 %
:RPS:PFM   128->203 PF07261 * DnaB_2 7e-09 38.2 %
:HMM:PFM   128->203 PF07261 * DnaB_2 9.7e-28 44.7 76/77  
:HMM:PFM   54->117 PF02002 * TFIIE_alpha 7.7e-06 22.2 63/105  
:HMM:PFM   2->74 PF01153 * Glypican 0.0009 23.4 64/559  
:BLT:SWISS 11->194 DNAD_BACSU 1e-28 34.2 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABD99500.1 GT:GENE ABD99500.1 GT:PRODUCT DNA replication protein dnaD GT:DATABASE GIB00337CH01 GT:ORG lsal0 GB:ACCESSION GIB00337CH01 GB:LOCATION 741709..742416 GB:FROM 741709 GB:TO 742416 GB:DIRECTION + GB:PRODUCT DNA replication protein dnaD GB:NOTE COG3935 [L] Putative primosome component and related proteins GB:PROTEIN_ID ABD99500.1 GB:DB_XREF GI:90820861 LENGTH 235 SQ:AASEQ MDSTLREFLRQGNTVISNLVLKNYKKLGMTDTEFILYLQLNSYLQKGETFPELENIAKSLQISVNDVYTQLHNLIEKKILKIETIVNQQGQKTDSYSFDFLYQKLDSLIDEEKKELLNVSAEKDRQKIFNAFQVEFGRDLSPIELETINDWIEEDKYKTDLILLALREAVLSQAYSLKYIDRILLSWEKQGIRSKVDVENLKKAREKKKENINTISNNNRNKENKPKIPLTKWLD GT:EXON 1|1-235:0| BL:SWS:NREP 1 BL:SWS:REP 11->194|DNAD_BACSU|1e-28|34.2|184/232| SEG 74->83|liekkilkie| SEG 206->228|ekkkenintisnnnrnkenkpki| BL:PDB:NREP 2 BL:PDB:REP 11->105|2v79B|2e-09|30.5|95/117| BL:PDB:REP 132->199|2zc2A|3e-09|43.3|67/74| RP:PFM:NREP 1 RP:PFM:REP 128->203|PF07261|7e-09|38.2|76/77|DnaB_2| HM:PFM:NREP 3 HM:PFM:REP 128->203|PF07261|9.7e-28|44.7|76/77|DnaB_2| HM:PFM:REP 54->117|PF02002|7.7e-06|22.2|63/105|TFIIE_alpha| HM:PFM:REP 2->74|PF01153|0.0009|23.4|64/559|Glypican| RP:SCP:NREP 1 RP:SCP:REP 128->194|2i5uA1|8e-13|25.4|67/74|a.275.1.1| OP:NHOMO 153 OP:NHOMOORG 135 OP:PATTERN -------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------11111111111111111111111111111111-111111111111111111111111111112111111111111111111111111111121211--111111111113333212221231111---1111--------------------------------111111---11--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------1------------------------------------------------------------------- STR:NPRED 162 STR:RPRED 68.9 SQ:SECSTR ##########HccccccHHHHHHHHHHTccHHHHHHHHHHHHHHTTTcccccHHHHHTTccccHHHHHHHHHHHHHHTccEEEEEEcTTccEEEEEEcHHHHHHH##########################HHHHHTc#ccHHHHHHHHHHHTTTcccHHHHHHHHHHHHHHTcccHHHHHHHHHHHHHTTcccHHHHc#################################### DISOP:02AL 1-1,111-126,199-224| PSIPRED ccHHHHHHHHcccccHHHHHHHHHHHccccHHHHHHHHHHHHHHccccccccHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHEEccccEEEEEEEHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHcccccHHHHHHHHHHHHHccccHHHHHHHHHHHHHcccccHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHcccccccccccccccccccHHHHcc //