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Lactobacillus salivarius UCC118 (lsal0)
Gene : ABD99513.1
DDBJ      :             Integrase/recombinase xerD
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  8/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
a.60.9
:276 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   4->217 3c28B PDBj 2e-07 13.8 %
:RPS:SCOP  7->110 1crxA1  a.60.9.1 * 1e-07 17.5 %
:HMM:SCOP  1->105 1a0pA1 a.60.9.1 * 2.7e-07 26.5 %
:HMM:PFM   7->91 PF02899 * Phage_integr_N 7.7e-12 25.3 79/84  
:HMM:PFM   127->169 PF12586 * DUF3760 5.2e-05 50.0 24/46  
:HMM:PFM   68->127 PF00119 * ATP-synt_A 0.00073 20.5 39/215  
:BLT:SWISS 8->132 XERD_RICCN 3e-04 26.3 %
:BLT:SWISS 109->261 NU159_YEAST 6e-04 24.8 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABD99513.1 GT:GENE ABD99513.1 GT:PRODUCT Integrase/recombinase xerD GT:DATABASE GIB00337CH01 GT:ORG lsal0 GB:ACCESSION GIB00337CH01 GB:LOCATION complement(749870..750700) GB:FROM 749870 GB:TO 750700 GB:DIRECTION - GB:PRODUCT Integrase/recombinase xerD GB:PROTEIN_ID ABD99513.1 GB:DB_XREF GI:90820874 LENGTH 276 SQ:AASEQ MSFPYEKRFILYLRNERFLEENTIADLTRDITRFFNYLRQNNPNYRDSLKVSSISSNDIKEYLNTLSITNNIKNTTYNKMLTHINTYFKFLFINNLSPVLPTLSIKGRKRTVNKTNDLAWTEKLAEYLVDDNLSLYTRMTLLLISHFYTIKEILQKDFYQELNQIEFTNFEYEFINLFNEEILNLQQRQHTHDIFLKKRLDIVSPQLTLPGLHKYLKKDQKNIDIKLSPRELYQNVVCYFILNNQNLSDTQLIQRLRLEDLTSLNYYRQKSSSTTE GT:EXON 1|1-276:0| BL:SWS:NREP 2 BL:SWS:REP 8->132|XERD_RICCN|3e-04|26.3|118/306| BL:SWS:REP 109->261|NU159_YEAST|6e-04|24.8|137/1460| SEG 68->79|itnniknttynk| RP:PDB:NREP 1 RP:PDB:REP 4->217|3c28B|2e-07|13.8|203/315| HM:PFM:NREP 3 HM:PFM:REP 7->91|PF02899|7.7e-12|25.3|79/84|Phage_integr_N| HM:PFM:REP 127->169|PF12586|5.2e-05|50.0|24/46|DUF3760| HM:PFM:REP 68->127|PF00119|0.00073|20.5|39/215|ATP-synt_A| RP:SCP:NREP 1 RP:SCP:REP 7->110|1crxA1|1e-07|17.5|97/110|a.60.9.1| HM:SCP:REP 1->105|1a0pA1|2.7e-07|26.5|98/0|a.60.9.1|1/1|lambda integrase-like, N-terminal domain| OP:NHOMO 9 OP:NHOMOORG 8 OP:PATTERN -------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------11----1-1111-----2------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 207 STR:RPRED 75.0 SQ:SECSTR ###HHHHHHHHHHHTGGGccHHHHHHHHHHHHHHHHHHHHTT######cccccccHHHHHHHHHHHHHHTTccHHHHHHHHHHHHHHHHHHTcccGGGcHHHHHHHHHHHHHHHHTTccccccccccHHHHHHHHHTTcccHHHHHHHHHHHHHHHHHHHcccHHHHHHccGGGEEEcTTccEEEEEcccccccccccEEEEccHH#HHHHHHHHHH########################################################### DISOP:02AL 1-1,268-277| PSIPRED cccHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHcccHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHccccccccccccEEcccccccccccccHHHHHHHHHccccccHHHHHHHHHHHccccHHHHHcccHHHHHcccHHcccHHHHHHHHHHHHHHHHcccccHHHHHHHccccccHHHHHHHHHHHHccHHHccccccccHHHHHHHHHHHHHccccccHHHHHHHHcccccHHHHHHHHHcccccc //