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Lactobacillus salivarius UCC118 (lsal0)
Gene : ABD99543.1
DDBJ      :             Transposase ISLasa9a, IS200-IS605 family
Swiss-Prot:             

Homologs  Archaea  24/68 : Bacteria  198/915 : Eukaryota  1/199 : Viruses  0/175   --->[See Alignment]
g.72.1
:425 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   117->240 3ee7B PDBj 2e-04 10.5 %
:RPS:PDB   366->399 3a43B PDBj 2e-04 30.8 %
:RPS:SCOP  345->400 1wj0A  g.72.1.1 * 2e-11 13.7 %
:RPS:PFM   89->324 PF01385 * Transposase_2 4e-18 38.4 %
:RPS:PFM   339->408 PF07282 * Transposase_35 2e-10 49.2 %
:HMM:PFM   87->322 PF01385 * Transposase_2 1.5e-24 22.3 202/227  
:HMM:PFM   336->409 PF07282 * Transposase_35 2.3e-22 44.1 68/69  
:HMM:PFM   13->51 PF12323 * HTH_14 1.8e-09 38.5 39/46  
:HMM:PFM   40->95 PF02697 * DUF217 0.00051 26.8 56/71  
:BLT:SWISS 44->129 RPOC2_OEDCA 3e-04 29.9 %
:BLT:SWISS 183->400 YSNA_STRPR 5e-24 35.7 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABD99543.1 GT:GENE ABD99543.1 GT:PRODUCT Transposase ISLasa9a, IS200-IS605 family GT:DATABASE GIB00337CH01 GT:ORG lsal0 GB:ACCESSION GIB00337CH01 GB:LOCATION 780847..782124 GB:FROM 780847 GB:TO 782124 GB:DIRECTION + GB:PRODUCT Transposase ISLasa9a, IS200-IS605 family GB:NOTE COG0675 [L] Transposase and inactivated derivatives GB:PROTEIN_ID ABD99543.1 GB:DB_XREF GI:90820904 LENGTH 425 SQ:AASEQ MKKMSDLEYHYGLKMRIYPSTNQKKIIKINGNIARTVYNKMVAIDQELYKLKQVKLPIDSVKERIKELKSRKNARNLSNHYQYMQDKNIDSLAKANAIQNYQKAWKMFRKVHSSGTPKFHKKSYRLSYQTNAQYGKDAKMDVYSASVKFLDKNHISLPKLGRLRVSGSHRRIIDNKDDIRIGTVTVSKDTADRYFVSMQLGSDTPFVKKLAKANSQVGVDLNTENFLTDSFGKVVANPRYYRTIKGKLAKAQKVLSRRQRRAKKEKRSLHDSKNYQKQRVLVAKLRDRVRNQRNNFLNHVTTALINNHDLVVVENLRSKNMLKNHALAISISDVGWRSFLQKLDYKANLYNRTVISVNPKNTTQTCYACGFIMGTNGTDKLNLKDREWTCPNCHEHHIRDWNAAKNILAKGLDKLEKPKNLAKAK GT:EXON 1|1-425:0| BL:SWS:NREP 2 BL:SWS:REP 44->129|RPOC2_OEDCA|3e-04|29.9|77/2617| BL:SWS:REP 183->400|YSNA_STRPR|5e-24|35.7|199/402| SEG 24->29|kkiiki| SEG 170->181|rriidnkddiri| RP:PDB:NREP 2 RP:PDB:REP 117->240|3ee7B|2e-04|10.5|105/115| RP:PDB:REP 366->399|3a43B|2e-04|30.8|26/117| RP:PFM:NREP 2 RP:PFM:REP 89->324|PF01385|4e-18|38.4|203/207|Transposase_2| RP:PFM:REP 339->408|PF07282|2e-10|49.2|65/70|Transposase_35| HM:PFM:NREP 4 HM:PFM:REP 87->322|PF01385|1.5e-24|22.3|202/227|Transposase_2| HM:PFM:REP 336->409|PF07282|2.3e-22|44.1|68/69|Transposase_35| HM:PFM:REP 13->51|PF12323|1.8e-09|38.5|39/46|HTH_14| HM:PFM:REP 40->95|PF02697|0.00051|26.8|56/71|DUF217| RP:SCP:NREP 1 RP:SCP:REP 345->400|1wj0A|2e-11|13.7|51/58|g.72.1.1| OP:NHOMO 927 OP:NHOMOORG 223 OP:PATTERN ------1-7114-3M--1------2--1424B-1---2----------215F3--1--1---1----- ----1---------------------------1---2-45-18E------------------1---A3113----51----------2--------------------2---------------------------B-12----4-23U4GC*DB11------21X2AK24-------------28-----18-22222-7C35331451-----23251-1-D3------4---------------------16-2--19-H2--5513-2---------------------------------------------------23---------2-5--922-53J14--4--11211A----1---1-1--6-------------------------------------------1--------------------------------111111111-----------------------------------------------B77-3B-------1-------1----1------------B1----------------------2-------------------------------------------3-2-51----------2-----2----31--------3------------2H-------------3--12221-1-32-22132113132-3111111-------D---1---1---1111121111233------------------------------1-------------54---------1J5----------------------------------------------------1-31----------1--5--1-------------------------------44-211-18-- -----------------------------------------------------------------1------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 131 STR:RPRED 30.8 SQ:SECSTR ####################################################################################################################EEEEEccTTTcccEEEEEEEE###########ccccccEEEEEEEccccccEEEEEcTTcc####cEEEEEccccEEEEEccTTccE###EEEEEEcTTccHHHHHHHHHHHHcccc#cccccc#############################################################################################################################ETTTccEE########ccccccccccccccccEE########################## DISOP:02AL 1-2,4-4,262-272,418-426| PSIPRED cccccccEEEEEEEEEEcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHcHHHHcccccHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHcccccccccccccccccEEEEccccccccEEEEccccEEEEcccEEEEcccEEEEEEEEEEEEccccccEEEEEEEEEEEcccEEEEEEEEEccccccccccccccEEEEEccHHHEEEEcccEEEcccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccEEEEEcccHHHHHHcccHHHHHHHccHHHHHHHHHHHHHHHccEEEEEcccccccccccccEEcccccccccccccEEEEccccccEEccHHHHHHHHHHHHHHHccccccccccc //