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Lactobacillus salivarius UCC118 (lsal0)
Gene : ABD99552.1
DDBJ      :             Phage transcriptional regulator, Cro/CI family
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  49/915 : Eukaryota  0/199 : Viruses  5/175   --->[See Alignment]
a.35.1
:131 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   5->75 1b0nA PDBj 3e-04 32.9 %
:RPS:PDB   2->84 2ebyA PDBj 1e-09 14.5 %
:RPS:SCOP  1->63 2o38A1  a.35.1.13 * 6e-10 9.5 %
:HMM:SCOP  2->66 1b0nA2 a.35.1.3 * 7.1e-09 38.5 %
:HMM:PFM   7->59 PF01381 * HTH_3 3.4e-11 34.0 53/55  
:HMM:PFM   42->79 PF08667 * BetR 0.00016 33.3 30/147  
:HMM:PFM   81->130 PF09556 * RE_HaeIII 0.00069 29.2 48/300  
:BLT:SWISS 1->113 RPC_BPPH1 2e-10 28.3 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABD99552.1 GT:GENE ABD99552.1 GT:PRODUCT Phage transcriptional regulator, Cro/CI family GT:DATABASE GIB00337CH01 GT:ORG lsal0 GB:ACCESSION GIB00337CH01 GB:LOCATION complement(785426..785821) GB:FROM 785426 GB:TO 785821 GB:DIRECTION - GB:PRODUCT Phage transcriptional regulator, Cro/CI family GB:NOTE COG0640 [K] Predicted transcriptional regulators GB:PROTEIN_ID ABD99552.1 GB:DB_XREF GI:90820913 LENGTH 131 SQ:AASEQ MTILERIQELAKKRDITLKELSLELGFSKNYLYSLKTQAPSADKLSKIADYFGVSTDYLLGRSSDKYDLSPQEKIDIGIEAEKMMKGLNDEGSVNFYGEPMSEEDKEATLSALNLLMTINRKKAKKKKDMN GT:EXON 1|1-131:0| BL:SWS:NREP 1 BL:SWS:REP 1->113|RPC_BPPH1|2e-10|28.3|113/144| SEG 122->128|kkakkkk| BL:PDB:NREP 1 BL:PDB:REP 5->75|1b0nA|3e-04|32.9|70/103| RP:PDB:NREP 1 RP:PDB:REP 2->84|2ebyA|1e-09|14.5|83/102| HM:PFM:NREP 3 HM:PFM:REP 7->59|PF01381|3.4e-11|34.0|53/55|HTH_3| HM:PFM:REP 42->79|PF08667|0.00016|33.3|30/147|BetR| HM:PFM:REP 81->130|PF09556|0.00069|29.2|48/300|RE_HaeIII| RP:SCP:NREP 1 RP:SCP:REP 1->63|2o38A1|6e-10|9.5|63/89|a.35.1.13| HM:SCP:REP 2->66|1b0nA2|7.1e-09|38.5|65/0|a.35.1.3|1/1|lambda repressor-like DNA-binding domains| OP:NHOMO 72 OP:NHOMOORG 54 OP:PATTERN -------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1111---111---1-1------12-------2---21------------11------1-3----1-----21-----21---131---1-2---------112-11-1331211-1121---------------------1-1-2------------------1---------1------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------1------------1--------1-----------------1-1----------------------------------------------- STR:NPRED 107 STR:RPRED 81.7 SQ:SECSTR HHHHHHHHHTTTTTTccHHHHHHHHTccHHHHHHHHTccccHHHHHHHHHHHTccHHHHHHHHHHHHHHHHHTcHHHHHHHHHcHcGGGHHHHHHHHGGGTTTcHHH######################## DISOP:02AL 1-1,68-68,121-132| PSIPRED ccHHHHHHHHHHHccccHHHHHHHHcccHHHHHHcccccccHHHHHHHHHHHcccHHHHHcccccccccccHHHHHHHHHHHHHHHHHccccEEEEccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccc //