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Lactobacillus salivarius UCC118 (lsal0)
Gene : ABD99593.1
DDBJ      :             Terminase large subunit
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  171/915 : Eukaryota  1/199 : Viruses  36/175   --->[See Alignment]
:588 amino acids
:PSIPRED
:DISOPRED
:RPS:PFM   111->565 PF03354 * Terminase_1 3e-90 42.3 %
:HMM:PFM   110->566 PF03354 * Terminase_1 2.6e-99 30.0 454/477  
:BLT:SWISS 42->563 TERL_BPSF5 1e-52 28.6 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABD99593.1 GT:GENE ABD99593.1 GT:PRODUCT Terminase large subunit GT:DATABASE GIB00337CH01 GT:ORG lsal0 GB:ACCESSION GIB00337CH01 GB:LOCATION 806143..807909 GB:FROM 806143 GB:TO 807909 GB:DIRECTION + GB:PRODUCT Terminase large subunit GB:NOTE COG4626 [R] Phage terminase-like protein, large subunit GB:PROTEIN_ID ABD99593.1 GB:DB_XREF GI:90820954 LENGTH 588 SQ:AASEQ MTSKILQYNQTQLEKWWNDYRGSMLGWAYLDKPSPVVLTTYYAKMVVEGDIPAGKNIILACKRHLRDLERQGDEDFPWVFDEEKAHRPIRFIEKKCKPSKSVNAQLILQPWQHFIVGSMFGWVHRDTGLRRFREGVVFVGRKNGKTTLESGLADYMAGFDGERGANVYFLANAQVQARKLYDESKAMIEHSPYLAKRFVTTRSEIRFPKTNSTIVPMSVEKKNKDGENVHFAVFDEIHEYKDYFLISAMKQARGARLQPLIMYISTAGYVLDGPLMDFIDNGKEALSDYDAHVDERTFYYLASLDKVEESDDPELWIKANPNLCLMDTVNLISDYIKDKRTPAEYATWLTKQFNIFSSTDELSFVTIETINKNKRMIDEDTLLGRSCIGGYDLSETEDFTATGLEFKLDDGSIFWKMQSFVPEERVRIDKNPERLQEWEKQGYLTIVPGEYVNYEYVYNWFVEQAKKYKIQQINYDPNKALFLNQSLQQYGFNTKVVRQGFTTLGGPMQNMKELLLDGKVVTNNNLMFRWYLNNVKLVTDRNNNWMPTKQSRNRKIDGFAALLNAHESLWENLNVKEKKARIKFVSLR GT:EXON 1|1-588:0| BL:SWS:NREP 1 BL:SWS:REP 42->563|TERL_BPSF5|1e-52|28.6|517/577| SEG 130->141|rrfregvvfvgr| RP:PFM:NREP 1 RP:PFM:REP 111->565|PF03354|3e-90|42.3|447/465|Terminase_1| HM:PFM:NREP 1 HM:PFM:REP 110->566|PF03354|2.6e-99|30.0|454/477|Terminase_1| OP:NHOMO 293 OP:NHOMOORG 208 OP:PATTERN -------------------------------------------------------------------- ------------------------------------1---------------------------1----------------1------1------------------1-----------------------------------1------------------------------------------------1-44444112123212-1-22---13-1-----1---21211112221-22221121--1-1----3-1---412223-2111-3-111---1---------1----1-2222--11-11------------2-112--23113212-22-111-11-----2--1-1-1----1-----------------------431----------------------3--1---1--3------1--------13122-1-----------1----------------------------------------11-------1---------2-2------------------1--1---1------------------1---------------111----------1-----------1-1---1-------------------------------1------1-1-------------------2---1--11-11-2-------2-1-1--11-----1-1-----11---121-------------11111---------------1------------1--1--11-----------------1-------1----12--1-----------------------------1--------------------------------1---------1---------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1---------- ---------------------------------------------------11------------------------1---1111---1-----1---11---1-1--111-11-1---1--1-1---12-11--------1-11--111111--------1------------- DISOP:02AL 1-2,4-7,220-223,338-341| PSIPRED ccEEEEEccHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHcccEEccHHHHHHHHHHHHHHHccccccccEEEcHHHHHHHHHHHHHHccccccccccEEcccHHHHHHHHHHEEEEccccEEEEEEEEEEEEccccHHHHHHHHHHHHHccccccccEEEEEEEcHHHHHHHHHHHHHHHHccHHHHHHccccccEEEEcccccEEEEEEcccccccccccEEEEEEccEEEccHHHHHHHHHHHccccccEEEEEEccccccccHHHHHHHHHHHHHccccccccccEEEEEEEEccccccccHHHHHHHcccccccccHHHHHHHHHHcccHHHHHHHHHHHccccccccccccccHHHHHHccccccHHHHcccEEEEEEEcccccccEEEEEEEEEccccEEEEEEEcccHHHHHHHHccccHHHHHHcccEEEEccccccHHHHHHHHHHHHHHccccEEEEcHHHHHHHHHHHHHccccEEEccccHHHHHHHHHHHHHHHHcccEEEcccHHHHHHHcccEEEEcccccEEEccccccccccHHHHHHHHHHHHHHccccccccccEEEEEEc //