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Lactobacillus salivarius UCC118 (lsal0)
Gene : ABD99596.1
DDBJ      :             Phage prohead protease
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  26/915 : Eukaryota  0/199 : Viruses  2/175   --->[See Alignment]
d.183.1
:376 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   259->367 1z8lA PDBj 6e-04 30.0 %
:RPS:PDB   167->374 3e8kG PDBj 3e-11 17.2 %
:RPS:SCOP  111->374 1ohgA  d.183.1.1 * 1e-13 18.2 %
:HMM:SCOP  108->375 1ohgA_ d.183.1.1 * 3.9e-30 22.5 %
:HMM:PFM   116->371 PF05065 * Phage_capsid 2e-28 21.2 250/276  
:HMM:PFM   14->85 PF10359 * Fmp27_WPPW 0.00074 23.6 72/476  
:COIL
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABD99596.1 GT:GENE ABD99596.1 GT:PRODUCT Phage prohead protease GT:DATABASE GIB00337CH01 GT:ORG lsal0 GB:ACCESSION GIB00337CH01 GB:LOCATION 809848..810978 GB:FROM 809848 GB:TO 810978 GB:DIRECTION + GB:PRODUCT Phage prohead protease GB:PROTEIN_ID ABD99596.1 GB:DB_XREF GI:90820957 LENGTH 376 SQ:AASEQ MTITLYEKKQNLGTLGSQLKKVNEEIAMKAGDPTVADKDLMQLQEQSESLEKRYNMLKEQVEREEAEQRAKFTKTKTPTMTAEEKLIHAKAEFYRGQKLSSDYKQVLGDDDSTTHGSKLLPVTIANDIIAEPTDTNPLRDDELVTAVTNLERPRIDVTIDDDSFVNDQEVAKEIGLKGDTVKFGRNKTKLKVAISEAILNGTDTNLVEHVNAQLQAGLARKEKKVAFAETAKPGEEEMSFYSTQNNIKKVSGSTLFDAITQAAGDIADEFQSDIKVYMTRPDYLKMIKELSNGAVSLFGKAPEEILGYPVRFTELAKKPVVGNFKYAQLNYEISSALYEQWKDYDKGVNNFQLTAWFDHKILLASAFRIADVVASK GT:EXON 1|1-376:0| COIL:NAA 33 COIL:NSEG 1 COIL:REGION 35->67| SEG 58->71|keqvereeaeqrak| BL:PDB:NREP 1 BL:PDB:REP 259->367|1z8lA|6e-04|30.0|100/695| RP:PDB:NREP 1 RP:PDB:REP 167->374|3e8kG|3e-11|17.2|204/247| HM:PFM:NREP 2 HM:PFM:REP 116->371|PF05065|2e-28|21.2|250/276|Phage_capsid| HM:PFM:REP 14->85|PF10359|0.00074|23.6|72/476|Fmp27_WPPW| RP:SCP:NREP 1 RP:SCP:REP 111->374|1ohgA|1e-13|18.2|258/280|d.183.1.1| HM:SCP:REP 108->375|1ohgA_|3.9e-30|22.5|267/0|d.183.1.1|1/1|Major capsid protein gp5| OP:NHOMO 31 OP:NHOMOORG 28 OP:PATTERN -------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------11111-----11-----11------1----------------2111-1211--2-----------------------1------------------------------------------------------1-1--1--1-----11--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------------------------1--1-------------------------------------------------------------- STR:NPRED 247 STR:RPRED 65.7 SQ:SECSTR ###############################################################################################################################cccccccccccccHcccHHHHccccccccccEEEEEEEcccccccccccEEEEEEEEcEEEEEEEEEcTTTTccHHTHHHHHTTTTHHHHHHHHHHHHHHcccTTccccHHHHcEEccGGGccTTccHHHHHHHHHHHHHTTTccccEEEccTTTTHHHTcEETTTEEccccccccccTTccccccTTTTEEEEEcHHHHEEEEEEEccccccTTTTTcccEEEEEEEEEEEccccGGGEEEEEccc## DISOP:02AL 1-1,62-86,376-377| PSIPRED ccEEHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHccccccHHHHHHHccccccccccEEcHHHHHHHHHccccccccccccccEEccccccccEEEEEEccccccHHHHHHHHHcccccEEEEccccEEEEEEHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHcccccEEEEEcccHHHHHHHHHHHHHHHHHcccEEEEEHHHHHHHHHHHHccccccccccHHHHccccEEEEccccccEEcccccEEEEEcccccccccHHHHHHHHHHHEEEEEEHHHHHHHHHHHHHHHHHcc //