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Lactobacillus salivarius UCC118 (lsal0)
Gene : ABD99659.1
DDBJ      :             Conserved hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  74/915 : Eukaryota  8/199 : Viruses  0/175   --->[See Alignment]
a.118.1
:218 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   4->218 3bvsA PDBj 4e-32 36.2 %
:RPS:SCOP  18->218 2b6cA1  a.118.1.17 * 2e-47 27.1 %
:HMM:SCOP  10->220 2b6cA1 a.118.1.17 * 1.7e-53 32.5 %
:RPS:PFM   23->213 PF08713 * DNA_alkylation 2e-15 32.0 %
:HMM:PFM   8->217 PF08713 * DNA_alkylation 4.6e-70 34.4 209/213  
:BLT:SWISS 45->122 RAD50_METJA 3e-05 36.4 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABD99659.1 GT:GENE ABD99659.1 GT:PRODUCT Conserved hypothetical protein GT:DATABASE GIB00337CH01 GT:ORG lsal0 GB:ACCESSION GIB00337CH01 GB:LOCATION 867571..868227 GB:FROM 867571 GB:TO 868227 GB:DIRECTION + GB:PRODUCT Conserved hypothetical protein GB:NOTE COG4912 [L] Predicted DNA alkylation repair enzyme GB:PROTEIN_ID ABD99659.1 GB:DB_XREF GI:90821020 LENGTH 218 SQ:AASEQ MASVQWVENEFEKHRNLDNALHMAKYMRNQFDFYGIKTPERRSIYKDIIREAKKAESIDWQLLNECWNNDYREFQYFVCDYLKALQKFLVFDDIDEIRPFIETKQWWDTIDSLDTVIGNINDSRVNDLMLKWSVSDDIWFRRIAINHQRGRKDKTDTVLLEKILINNLNNNEFFINKSIGWALRDYSKTNTDWVKNFITKHKSGLSTLSIREASKYLK GT:EXON 1|1-218:0| BL:SWS:NREP 1 BL:SWS:REP 45->122|RAD50_METJA|3e-05|36.4|66/100| SEG 159->177|llekilinnlnnneffink| BL:PDB:NREP 1 BL:PDB:REP 4->218|3bvsA|4e-32|36.2|213/227| RP:PFM:NREP 1 RP:PFM:REP 23->213|PF08713|2e-15|32.0|178/202|DNA_alkylation| HM:PFM:NREP 1 HM:PFM:REP 8->217|PF08713|4.6e-70|34.4|209/213|DNA_alkylation| RP:SCP:NREP 1 RP:SCP:REP 18->218|2b6cA1|2e-47|27.1|199/213|a.118.1.17| HM:SCP:REP 10->220|2b6cA1|1.7e-53|32.5|209/0|a.118.1.17|1/1|ARM repeat| OP:NHOMO 88 OP:NHOMOORG 82 OP:PATTERN -------------------------------------------------------------------- -------1111----------------------111-----1-1--------111--1----------------------------------------------------------------------------------------------------------------------------------------11111111-111111------111-------1111111---------------------12-1111-1-1------11----111111----111-1-11-------------------122111---1-------------------------------------------------1-------------------------------------------------------------------------------------------------------------------------------------------------1---------1---------------------------1-------------1----------1----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1--------------------------------------------------------------------------------1------------------------------------------------------- ----11-----------------------------------------------------------------------------------------------------1--2----------------------------------------------------12--------12------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 215 STR:RPRED 98.6 SQ:SECSTR ###HHHHHHHHHHTccHHHHHHHHHHTTTccccccccHHHHHHHHHHHHHHHccccGGGHHHHHHHHTcccHHHHHHHHHHHHHTGGGccGGGHHHHHHHHHccccHHHHTTTTTHHHHHcGGGcTTTHHHHHTTTcHHHHHHHHHTTTTcGGGccHHHHHHHHHHHTTcccHHHHHHHHHHHHHHTTTcHHHHHHHHHHccccccHHHHHHHHTTTG DISOP:02AL 1-1,218-219| PSIPRED ccHHHHHHHHHHHHccHHHHHHHHHHcccccEEEEcccHHHHHHHHHHHHHHHccccccHHHHHHHHHcHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHcccccHHHHHHHHHHHHHcccHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHcccHHHHHHHHHccccccHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHccHHHHHHHHHHcc //