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Lactobacillus salivarius UCC118 (lsal0)
Gene : ABD99660.1
DDBJ      :             Transporter, drug/metabolite exporter family
Swiss-Prot:             

Homologs  Archaea  3/68 : Bacteria  199/915 : Eukaryota  1/199 : Viruses  0/175   --->[See Alignment]
f.39.1
:310 amino acids
:PSIPRED
:DISOPRED
:RPS:SCOP  53->146 1s7bA  f.39.1.1 * 4e-06 13.8 %
:RPS:SCOP  230->296 1s7bA  f.39.1.1 * 3e-05 17.9 %
:HMM:SCOP  52->152 1s7bA_ f.39.1.1 * 6.5e-09 25.7 %
:HMM:SCOP  195->302 1s7bA_ f.39.1.1 * 1.2e-10 20.0 %
:RPS:PFM   230->293 PF00892 * EamA 1e-05 29.7 %
:HMM:PFM   20->148 PF00892 * EamA 5.6e-16 24.2 124/126  
:HMM:PFM   172->293 PF00892 * EamA 5.2e-17 25.6 121/126  
:BLT:SWISS 1->271 YDED_BACSU 7e-35 29.9 %
:TM

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABD99660.1 GT:GENE ABD99660.1 GT:PRODUCT Transporter, drug/metabolite exporter family GT:DATABASE GIB00337CH01 GT:ORG lsal0 GB:ACCESSION GIB00337CH01 GB:LOCATION 868328..869260 GB:FROM 868328 GB:TO 869260 GB:DIRECTION + GB:PRODUCT Transporter, drug/metabolite exporter family GB:NOTE COG0697 [GER] Permeases of the drug/metabolite transporter (DMT) superfamily GB:PROTEIN_ID ABD99660.1 GB:DB_XREF GI:90821021 LENGTH 310 SQ:AASEQ MKSSSKVMKGIFWSAVASATWGISGTTIQFISQNQHIPTDWFLSTRTLGSGTILLIISFILYGKKTFNVFSTWKSFGHLFAYATLGLMANLLTFYLAIQSGNASAATILQYLSPLFIVLGGIFIKHQRPLSTDLIAFIISLLGVLLAITKGDLTQMSIPMNSFLWGLGSGITAAFYVVLPRPIAQDNPPLVVLGWGTFIAGVLFNIYHPVWINTPHITSTVVLSISTVILVGTIIPFGLLLYSSRFAPSDVISIMDALQPVTTSILSVIFLGLEMNWVEIVGIILVIVAIYILQRGRRNMEKINYREDEF GT:EXON 1|1-310:0| BL:SWS:NREP 1 BL:SWS:REP 1->271|YDED_BACSU|7e-35|29.9|268/319| TM:NTM 9 TM:REGION 8->30| TM:REGION 42->63| TM:REGION 78->99| TM:REGION 103->125| TM:REGION 130->152| TM:REGION 158->180| TM:REGION 189->211| TM:REGION 219->241| TM:REGION 268->290| RP:PFM:NREP 1 RP:PFM:REP 230->293|PF00892|1e-05|29.7|64/125|EamA| HM:PFM:NREP 2 HM:PFM:REP 20->148|PF00892|5.6e-16|24.2|124/126|EamA| HM:PFM:REP 172->293|PF00892|5.2e-17|25.6|121/126|EamA| GO:PFM:NREP 1 GO:PFM GO:0016020|"GO:membrane"|PF00892|IPR000620| RP:SCP:NREP 2 RP:SCP:REP 53->146|1s7bA|4e-06|13.8|94/106|f.39.1.1| RP:SCP:REP 230->296|1s7bA|3e-05|17.9|67/106|f.39.1.1| HM:SCP:REP 52->152|1s7bA_|6.5e-09|25.7|101/106|f.39.1.1|1/2|Multidrug resistance efflux transporter EmrE| HM:SCP:REP 195->302|1s7bA_|1.2e-10|20.0|105/106|f.39.1.1|2/2|Multidrug resistance efflux transporter EmrE| OP:NHOMO 311 OP:NHOMOORG 203 OP:PATTERN ---------------------------------------------1------2-----1--------- -1---------------------------------------------------------------------1111---1132-------------------1----1------------------------------------------------------------------------------------111444444543454434-111-14441--2---------111111111111111113--12-3222223212552222242111222111111111122222222222--------------111111111---11------------11-11-----------22-1---11------11-----------------------1-----------1--------------------------------------------------------------------------------------------------------------------------------------------------------------------1-------1--------------------1-11111111-------------------------1--------------------------1-1------1---11-1111111111-111111111111111111112111---11-1111111111111-111---------------------------------------------------------------------------------------------------1-----------------------------------------------------------------1----------- -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 1-5,8-8,297-311| PSIPRED ccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHcHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHccHHcccccccHHHcc //