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Lactobacillus salivarius UCC118 (lsal0)
Gene : ABD99685.1
DDBJ      :             DegV family protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  264/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
c.119.1
:310 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   21->301 3fysA PDBj 2e-63 46.2 %
:RPS:PDB   22->302 2dt8A PDBj 7e-49 26.6 %
:RPS:SCOP  21->304 1pzxA  c.119.1.1 * 7e-71 27.1 %
:HMM:SCOP  20->304 1mgpA_ c.119.1.1 * 2.6e-91 46.6 %
:RPS:PFM   99->304 PF02645 * DegV 4e-39 44.8 %
:HMM:PFM   96->303 PF02645 * DegV 1.2e-59 41.5 205/211  
:BLT:SWISS 22->301 Y2658_LISIN 1e-68 46.6 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABD99685.1 GT:GENE ABD99685.1 GT:PRODUCT DegV family protein GT:DATABASE GIB00337CH01 GT:ORG lsal0 GB:ACCESSION GIB00337CH01 GB:LOCATION 900222..901154 GB:FROM 900222 GB:TO 901154 GB:DIRECTION + GB:PRODUCT DegV family protein GB:NOTE COG0718 [S] Uncharacterized protein conserved in bacteria GB:PROTEIN_ID ABD99685.1 GB:DB_XREF GI:90821046 LENGTH 310 SQ:AASEQ MNIIYGMIINVIIKKVGVHFMKIAVVTDSTAYLEPEVAEQYGIKVVPIPFIIDNKVYNEGIDITTEEFYSKLKTSESFPSTSQPAIGELINLYTSLGNEGYDAVISIHLAGTISGLVQTIENIREQVTNIDVIPFDSKITVRLMGNLAIAAAKMAQAGKDVDEIISTLESLRSTIKEYFVVDDLQNLVRGGRLSNASAFIGSVLKIKPILTFDDESDKIVAFDKVRSTKRALKRVEDLFEENIKDRSYPLRLIVFHANNEEMAMEWKAKLQEKYPDYPIDVSYFGPVIGTHLGEKELALGWMKDIEKLDF GT:EXON 1|1-310:0| BL:SWS:NREP 1 BL:SWS:REP 22->301|Y2658_LISIN|1e-68|46.6|277/283| SEG 1->13|mniiygmiinvii| SEG 148->157|aiaaakmaqa| BL:PDB:NREP 1 BL:PDB:REP 21->301|3fysA|2e-63|46.2|277/282| RP:PDB:NREP 1 RP:PDB:REP 22->302|2dt8A|7e-49|26.6|274/277| RP:PFM:NREP 1 RP:PFM:REP 99->304|PF02645|4e-39|44.8|203/210|DegV| HM:PFM:NREP 1 HM:PFM:REP 96->303|PF02645|1.2e-59|41.5|205/211|DegV| RP:SCP:NREP 1 RP:SCP:REP 21->304|1pzxA|7e-71|27.1|269/278|c.119.1.1| HM:SCP:REP 20->304|1mgpA_|2.6e-91|46.6|281/285|c.119.1.1|1/1|DAK1/DegV-like| OP:NHOMO 693 OP:NHOMOORG 264 OP:PATTERN -------------------------------------------------------------------- ----1---------111----1--1------11111111-1-----------111111--111-221111--------34542---------------------------------------------------1-1112277731-------------------------------------2222122--32333333333333333313332333332335533333322322222221222222222224361442344466224444422543333333334332222222222233333333333334333323334154444444444646-355444484-34355-166-1-4642-1111311-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1--1111------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1111-----------------------------1-----------------------------------------------------------------------------811121-111-121---2--121---3522221121--- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 284 STR:RPRED 91.6 SQ:SECSTR ####################ccEEEEEEGGGcccHHHHTTTTcEEEccEEEETTEEEETTTTccHHHHHHHHHTTccccEEEcccHHHHHHHHHHHTTcTccEEEEEEccTTTcTHHHHHHHHHTTcTTcEEEEEEccccTHTHHHHHHHHHHHHHHTccHHHHHHHHHHHHHccEEEEEccccHHHHHHTccGGGGGGTTTcTTcEEEEEEETEETEEEEEEEEccHHHHHHHHHHHHHHHHTTccccEEEEEEEcccTHHHHHHHHHHHccccEEEEEEEEccHHHHHHHcTTcEEEEEEcc###### DISOP:02AL 1-1,78-80| PSIPRED ccHHHHHHHHHHHHHHcccEEEEEEEEEccccccHHHHHHcccEEEEEEEEEccEEEEccccccHHHHHHHHHccccccccccccHHHHHHHHHHHHHccccEEEEEEccccHHHHHHHHHHHHHHcccccEEEEccHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHEEEEEEEccHHHHHHccccHHHHHHHHHHHcEEEEEEEEccccEEEEEEEcccHHHHHHHHHHHHHHHHccccccEEEEEEEcccHHHHHHHHHHHHHHccccEEEEEccccEEEEEEcccEEEEEEEcccccccc //