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Lactobacillus salivarius UCC118 (lsal0)
Gene : ABD99738.1
DDBJ      :             Transposase ISLasa4k, ISL3 family
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  97/915 : Eukaryota  0/199 : Viruses  1/175   --->[See Alignment]
b.82.1
:364 amino acids
:PSIPRED
:DISOPRED
:RPS:SCOP  215->277 1xsqA  b.82.1.14 * 8e-04 16.7 %
:RPS:PFM   163->264 PF01610 * Transposase_12 3e-12 33.0 %
:HMM:PFM   162->263 PF01610 * Transposase_12 1.6e-24 29.3 99/100  
:BLT:SWISS 107->259 ISPG_LEPIN 5e-05 25.5 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABD99738.1 GT:GENE ABD99738.1 GT:PRODUCT Transposase ISLasa4k, ISL3 family GT:DATABASE GIB00337CH01 GT:ORG lsal0 GB:ACCESSION GIB00337CH01 GB:LOCATION complement(955313..956407) GB:FROM 955313 GB:TO 956407 GB:DIRECTION - GB:PRODUCT Transposase ISLasa4k, ISL3 family GB:NOTE COG0675 [L] Transposase and inactivated derivatives GB:PROTEIN_ID ABD99738.1 GB:DB_XREF GI:90821099 LENGTH 364 SQ:AASEQ MDNNIKLLLGITDPNLTIDPKYQYTSYIEEKIIKNSKALLCHLYLSYPMYCPNCKALMLHNGTKVVNNVHLSSAGKKLVLSIKKQKYLCPECKKTATAKFKDTNYHDHFSNAVKAKLVRDLSLSRPMCEIAADSFTSSNTIIRSLESVENNFKVNRNWLPSHLSLDDFKSGKRFSSSGMSMCLINAVNHRIIDIIPERNNKFLRNYFIQYSYKARLSVMTITVDLYAPYRSLIKELFPNAFIIADKFHVVTQAYTAMNKIRIRVMKEYGAGTHEYRALKRFWKLLLKNQDDVDYHRYYPRINFKYAELSDSEVLDRLFDMSSELKTAYKYYQLLLQMYRKNSCQLLNLLTDTSSWNLPPEMRQA GT:EXON 1|1-364:0| BL:SWS:NREP 1 BL:SWS:REP 107->259|ISPG_LEPIN|5e-05|25.5|137/663| RP:PFM:NREP 1 RP:PFM:REP 163->264|PF01610|3e-12|33.0|97/100|Transposase_12| HM:PFM:NREP 1 HM:PFM:REP 162->263|PF01610|1.6e-24|29.3|99/100|Transposase_12| GO:PFM:NREP 3 GO:PFM GO:0003677|"GO:DNA binding"|PF01610|IPR002560| GO:PFM GO:0004803|"GO:transposase activity"|PF01610|IPR002560| GO:PFM GO:0006313|"GO:transposition, DNA-mediated"|PF01610|IPR002560| RP:SCP:NREP 1 RP:SCP:REP 215->277|1xsqA|8e-04|16.7|54/154|b.82.1.14| OP:NHOMO 484 OP:NHOMOORG 98 OP:PATTERN -------------------------------------------------------------------- --------------------------------------------------------------------------------1------------------------------------------------------------------34-5-R---------------5-----------------------------------------e-----------7-----------A8---262288A221--U---3-92171R5-A42---H---2---2--1455-218517577B18-------11----11119CJ111------------------------B----1-------1-------4---2-----------------------------------------------------------------------------11111111--------------------------------------1--------------------------------7------------------------------------------------------------1--------------------------------------------1--2--------------3----2--------1-------------------------------------------------1-------------------------------------------------655-2--------1---------2---21------------------1----------------------------1--------1--------------------------------------------------8------------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------1------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 1-1,269-274,360-360,363-365| PSIPRED ccccHHHHccccccccEEEcccccccEEEEEEEccEEEEEEEEEEcccccccccccEEEEcccEEEEEEEEcccccEEEEEEcccEEEEccccEEEEEEcccccccccccHHHHHHHHHHHHccccHHHHHHHHcccHHHHHHHHHHHHHHHcccccccccEEEEEEEEEccccccccEEEEEEEccccEEEEEEccccHHHHHHHHHHccHHHHccEEEEEEEccHHHHHHHHHHccccEEEEcHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHcHHHHHcccccccHHHHHHHHHHccccccHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHccccHHHHHHHHccccccHHHHcc //