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Lactobacillus salivarius UCC118 (lsal0)
Gene : ABD99745.1
DDBJ      :             Conserved hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  245/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
a.4.5b.40.4
:288 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   10->259 3go5A PDBj 4e-62 54.5 %
:RPS:PDB   11->215 3bzkA PDBj 7e-10 16.7 %
:RPS:PDB   209->281 2b0lA PDBj 6e-04 13.6 %
:RPS:SCOP  155->216 2ba0A1  b.40.4.5 * 2e-07 17.7 %
:RPS:SCOP  241->281 1sfuA  a.4.5.19 * 1e-04 22.0 %
:HMM:SCOP  150->217 1sroA_ b.40.4.5 * 4.5e-05 25.0 %
:HMM:PFM   246->280 PF01978 * TrmB 0.00092 25.7 35/68  
:BLT:SWISS 51->287 CVFB_STAEQ 9e-48 41.5 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABD99745.1 GT:GENE ABD99745.1 GT:PRODUCT Conserved hypothetical protein GT:DATABASE GIB00337CH01 GT:ORG lsal0 GB:ACCESSION GIB00337CH01 GB:LOCATION complement(965060..965926) GB:FROM 965060 GB:TO 965926 GB:DIRECTION - GB:PRODUCT Conserved hypothetical protein GB:NOTE COG0718 [S] Uncharacterized protein conserved in bacteria GB:PROTEIN_ID ABD99745.1 GB:DB_XREF GI:90821106 LENGTH 288 SQ:AASEQ MLENILGREIVAKVTDFNDKYIFAQVDGLTFRMARDELLKAPKVNSSLKGFAYINDNHQLQLTKKVPKVQVDRYAWGTVVSSRKDLGVFVDIGLPNKDIVVSVDDLPELPQLWPQKGDKLMIGLSIDAKDRMWGKLATPEMFQTISGMAKKNMQNKNVTATVYRLKLVGTFVITDDYYLGFIHPSEREVEPRLGEVVKARVIGVKDDGTLNLSTRPRAYEAISDDSQMILMALQHTSAKQLPFTDKSSPDEIKAYFGISKGQFKRAVGHLMKAGLVKQVDGFLILNEN GT:EXON 1|1-288:0| BL:SWS:NREP 1 BL:SWS:REP 51->287|CVFB_STAEQ|9e-48|41.5|234/298| BL:PDB:NREP 1 BL:PDB:REP 10->259|3go5A|4e-62|54.5|242/277| RP:PDB:NREP 2 RP:PDB:REP 11->215|3bzkA|7e-10|16.7|203/728| RP:PDB:REP 209->281|2b0lA|6e-04|13.6|66/98| HM:PFM:NREP 1 HM:PFM:REP 246->280|PF01978|0.00092|25.7|35/68|TrmB| RP:SCP:NREP 2 RP:SCP:REP 155->216|2ba0A1|2e-07|17.7|62/83|b.40.4.5| RP:SCP:REP 241->281|1sfuA|1e-04|22.0|41/70|a.4.5.19| HM:SCP:REP 150->217|1sroA_|4.5e-05|25.0|68/0|b.40.4.5|2/2|Nucleic acid-binding proteins| OP:NHOMO 245 OP:NHOMOORG 245 OP:PATTERN -------------------------------------------------------------------- ----------------------------------------------------------------------------------------1111-111-----111-111-1----------------------------------------------------------------------------------111111111111111111111111111--111111111111111111111111111111111111111111111111111111-11111111111111111111111111111111111111111111111-11111111111111-111111111-11-11---1-------------1---1---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1-11111--------11111-1-------1--1-------------------1---1--111--11--111-------111-1--------------------------------------------------------------------------------------------------------------------1-11-------------------------1111111111111111111111-11111-11111111111111----------------------------------1-------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 276 STR:RPRED 95.8 SQ:SECSTR #########EcTTccHHHHHHHHHHHHHHccccccGGGGGcTTccHHHHHHHGHTTEEcTTcccGGGGccccGGGHHHHHHHHHHTTccHHHHTTcHHHHHHccGGGTccccccHHEHHHHHHHHHHcTTccccccccHHHHHHTcccGGGccTTcEEEEEEEEEETTEEEEEccccccEEEEGGGGcccccTTcEEEEEEEEETTTTEEEEEccEEcccEEEEccGGGHHHHHcGGGHHHHHHHHHHTcEEEEcTTcEEEEEccHHHHHHHHHHHHHHEccEEE### DISOP:02AL 1-2,288-289| PSIPRED ccHHHccEEEEEEEEEEEcEEEEEccccEEEEEcccccccccccccEEEEEEEEccccccHHHHcccEEEEccEEEEEEEEEEcccEEEEEEccccccEEEEEcccccccEEccccccEEEEEEEEcccccEEEccccccccHHHcccccccccccEEEEEEEEEccccEEEEEcccEEEEEEHHHHccccccccEEEEEEEEEccccEEEEEEccccHHHHHHHHHHHHHHHHHcccEEEEEcccccHHHHHHHHcccHHHHHHHHHHHHHcccEEEEccEEEEccc //