[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Lactobacillus salivarius UCC118 (lsal0)
Gene : ABD99783.1
DDBJ      :             Conserved hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  236/915 : Eukaryota  46/199 : Viruses  0/175   --->[See Alignment]
c.2.1
:281 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   5->278 2zcvA PDBj 7e-42 36.0 %
:RPS:PDB   2->223 1bi9D PDBj 7e-04 18.1 %
:RPS:SCOP  5->212 1xq6A  c.2.1.2 * 7e-22 22.1 %
:HMM:SCOP  4->245 1k6xA_ c.2.1.2 * 2.4e-40 31.4 %
:RPS:PFM   5->223 PF05368 * NmrA 7e-19 32.1 %
:HMM:PFM   5->156 PF05368 * NmrA 2.7e-15 28.8 146/233  
:BLT:SWISS 5->278 YTFG_ECOLI 2e-41 36.0 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABD99783.1 GT:GENE ABD99783.1 GT:PRODUCT Conserved hypothetical protein GT:DATABASE GIB00337CH01 GT:ORG lsal0 GB:ACCESSION GIB00337CH01 GB:LOCATION complement(991383..992228) GB:FROM 991383 GB:TO 992228 GB:DIRECTION - GB:PRODUCT Conserved hypothetical protein GB:NOTE COG0702 [MG] Predicted nucleoside-diphosphate-sugar epimerases GB:PROTEIN_ID ABD99783.1 GB:DB_XREF GI:90821144 LENGTH 281 SQ:AASEQ MKYGITAATGHFGQVAVKELVGLVGADNVVAIARNLEKAKQLLPDDIEIRQGDYDDKNSLVSAFEGLDKVLFISSQPGGKITRLEQHTNVVDALKEAKVDFVAYTSFPHADQAKSALASDHIATEKLIVESGIKHSFLRNNWYLENEAGFLNGEDIVYAAGDGKVGWALEREYAEGAVKVLVSDETKDVYEFAGASRSYADLAKAVGEVYGKEIAVTNVASEDYKASLEKAGLDENTIGFILIIQDLIKQGELTEETSDLVDVLGHELKALPEAIKEVIGR GT:EXON 1|1-281:0| BL:SWS:NREP 1 BL:SWS:REP 5->278|YTFG_ECOLI|2e-41|36.0|272/286| BL:PDB:NREP 1 BL:PDB:REP 5->278|2zcvA|7e-42|36.0|272/283| RP:PDB:NREP 1 RP:PDB:REP 2->223|1bi9D|7e-04|18.1|215/482| RP:PFM:NREP 1 RP:PFM:REP 5->223|PF05368|7e-19|32.1|215/234|NmrA| HM:PFM:NREP 1 HM:PFM:REP 5->156|PF05368|2.7e-15|28.8|146/233|NmrA| RP:SCP:NREP 1 RP:SCP:REP 5->212|1xq6A|7e-22|22.1|204/253|c.2.1.2| HM:SCP:REP 4->245|1k6xA_|2.4e-40|31.4|239/350|c.2.1.2|1/1|NAD(P)-binding Rossmann-fold domains| OP:NHOMO 345 OP:NHOMOORG 282 OP:PATTERN -------------------------------------------------------------------- 1---3---111--------------------------222-2-23---1221-221------2-3--211----------------------------------14-1------------------------------------11------------------1-1-11---------------1--------------------1---1111---1-1--11111111-1--111111111111111--1---1-11221--2211--1111--111--------11---------------------------------1-------------------------------------------------11-2111------1--12---1--1-------------1-111--2-1--111121111211--1----1----------------1-----------------------------------------------11-1------------------1--------11-1---1-1-------21---------------1--------1-----1--------11-112-----------------------------------1-1--1-------------------------------1111-1-1111111111-111111111111111111111111-11111111111111111--11111111-111111111111---------------1-1----21--------------------1-1------------111--------------------------111111111111----------------------------------------------------------- ----232--------111122224432-111--111-1-1111-1121-22211----1------------------------------1111-2-----------------------------------------------------------------------------------------1---------3343- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 278 STR:RPRED 98.9 SQ:SECSTR #HHHHHHHTTcEEEEEccccccHHHHGGEEHHHHHHHHHHHTccTTcEEccccTTTHHHHHHTcTTccEEEEEEcHHHHHHHHHHHHTTccEEEEEETcccccEEEcTTccHHHHHHHHHHTcccEEEEEHHHHHHHHHHHHTcccccTTcTTcccccHHHHHHHHHHHHHHHTTTcEEEEcccccccccccEEEEcccTTcHHHHccccccEEEEEEEccHHHHHHHHHTcccHHHHHHHHHHHHHHHTTTTcccccHHHHHHTcccccHHHHHHHTc## PSIPRED cEEEEEccccHHHHHHHHHHHHcccccEEEEEEccHHHHHHHHccccEEEEcccccHHHHHHHHccccEEEEEcccccccHHHHHHHHHHHHHHHHccccEEEEEccccccccccHHHHHHHHHHHHHHHccccEEEEEcccccccHHHHHccccEEEEcccccEEEEEHHHHHHHHHHHHHccccccEEEEccccccHHHHHHHHHHHHcccccEEEccHHHHHHHHHHccccHHHHHHHHHHHHHHHccccccccHHHHHHHccccccHHHHHHHHHcc //