[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Lactobacillus salivarius UCC118 (lsal0)
Gene : ABD99803.1
DDBJ      :             UDP-N-acetylglucosamine 4,6-dehydratase / UDP-D-quinovosamine 4-dehydrogenase
Swiss-Prot:             

Homologs  Archaea  30/68 : Bacteria  572/915 : Eukaryota  85/199 : Viruses  0/175   --->[See Alignment]
c.2.1e.26.1
:629 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   288->624 2gn4A PDBj 3e-39 34.7 %
:RPS:PDB   221->560 1e2uA PDBj 3e-34 14.2 %
:RPS:SCOP  224->560 1e1dA  e.26.1.1 * 4e-34 12.4 %
:HMM:SCOP  151->285 1xcbA2 c.2.1.12 * 7.6e-15 29.4 %
:HMM:SCOP  294->595 1udbA_ c.2.1.2 * 5.5e-56 30.9 %
:RPS:PFM   296->585 PF02719 * Polysacc_synt_2 e-104 65.0 %
:HMM:PFM   296->583 PF02719 * Polysacc_synt_2 2.1e-125 59.8 286/296  
:HMM:PFM   153->233 PF02629 * CoA_binding 3.5e-05 19.7 76/96  
:BLT:SWISS 71->589 EPSC_BACSU e-101 41.6 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABD99803.1 GT:GENE ABD99803.1 GT:PRODUCT UDP-N-acetylglucosamine 4,6-dehydratase / UDP-D-quinovosamine 4-dehydrogenase GT:DATABASE GIB00337CH01 GT:ORG lsal0 GB:ACCESSION GIB00337CH01 GB:LOCATION complement(1012569..1014458) GB:FROM 1012569 GB:TO 1014458 GB:DIRECTION - GB:PRODUCT UDP-N-acetylglucosamine 4,6-dehydratase / UDP-D-quinovosamine 4-dehydrogenase GB:NOTE COG1086 [MG] Predicted nucleoside-diphosphate sugar epimerases GB:PROTEIN_ID ABD99803.1 GB:DB_XREF GI:90821164 LENGTH 629 SQ:AASEQ MNSINKIKSLPQWVFRAFYLSLYDLITVNFAYFIVLWLHYNLRYTTIPLKYLQAYLSFVPVYSLFTLSVFYFLKLYKSIWKYVSLSEMNRILLATIVTAIFHGIGITVLCTRMPISYYLMGPLFQFMFTVSVRFAYRFINLVRRRKQRNENAKYNSLIIGAGSAGQIIIKELENSSVAQSVPKCVIDDDPNKWGRMLKNIPIIGGREKIIEAVQKFDITQIIFTIPSASAKDKREILNICKETDCKLLTLPGVYQLLNEEVFLQHLKPVAVEDLLGREPIKADLGQIKKQIQGKVVLITGGGGSIGSELCRQIATYDPKQLIVFDIYENNAYSIEQELKRNYPNLNLKVLIGSVRDQKRVDDIFSSYRPDIVYHAAAHKHVPLMEGSPNEAVKNNVVGTYNTSKAALKYNAERFVLISTDKAVNPTNAMGASKRICEMIIQMMDKDSRNRKKRTQFVAVRFGNVLGSNGSVIPLFKKQIAAGGPVTVTHPDIIRYFMTISEAVGLVLQAGAYAAGGEIFVLDMGQPIKIDTLARNLIKLSGLHPDEDIEIKYIGLRPGEKLYEEKLMAEEGLQKTENQLIYIGKPIPFDEKKFLKNLQNLIQSSQENPKNIEAQMQKIVPNFKFQEVVG GT:EXON 1|1-629:0| BL:SWS:NREP 1 BL:SWS:REP 71->589|EPSC_BACSU|e-101|41.6|510/598| TM:NTM 3 TM:REGION 17->39| TM:REGION 56->78| TM:REGION 91->113| SEG 158->169|iigagsagqiii| BL:PDB:NREP 1 BL:PDB:REP 288->624|2gn4A|3e-39|34.7|308/329| RP:PDB:NREP 1 RP:PDB:REP 221->560|1e2uA|3e-34|14.2|317/552| RP:PFM:NREP 1 RP:PFM:REP 296->585|PF02719|e-104|65.0|286/291|Polysacc_synt_2| HM:PFM:NREP 2 HM:PFM:REP 296->583|PF02719|2.1e-125|59.8|286/296|Polysacc_synt_2| HM:PFM:REP 153->233|PF02629|3.5e-05|19.7|76/96|CoA_binding| GO:PFM:NREP 1 GO:PFM GO:0009058|"GO:biosynthetic process"|PF02719|IPR003869| RP:SCP:NREP 1 RP:SCP:REP 224->560|1e1dA|4e-34|12.4|314/553|e.26.1.1| HM:SCP:REP 151->285|1xcbA2|7.6e-15|29.4|126/0|c.2.1.12|1/1|NAD(P)-binding Rossmann-fold domains| HM:SCP:REP 294->595|1udbA_|5.5e-56|30.9|269/0|c.2.1.2|1/1|NAD(P)-binding Rossmann-fold domains| OP:NHOMO 1038 OP:NHOMOORG 687 OP:PATTERN 11------111111----------1--1---1111-11-2--1----2-121111-11-1----1--3 -31-2--111-------------------------------111---2---1---1-2----1--1----1-111----12-11-2316434-8-----12133121212--------------1----11-122-11133-----1-1---11---11-1-11-1---41-111112-11-11----11---4-----21--12-13-112232-13---1122------111222222221222212--21--------1-1-------1-11-----------1--21111121112-------------1--------2111132221331222-133211-22411-1212113213113---1--2--1-3332------112242-1121211111111112-2112121111--111-23234221-12132-211111--3333333311111212------------1111111111111-----1-11-122131111111111111121111111111111--2-111-1--211112221111112233332221412222211111121--12321214211-21--322222222221211111111112211--22-32-223122312331121112221323---241-------1112-1----1-11111--1---211---1-------211112111111111111-2121-1------1--111111111111---------1111112-3-1-111-1-111-13111-1111211111212232212331231211111111-53321111112123111111111111111-21223222--------212-------------------------1142332232--- ---11-1-11--1421111--1-11---------------------1111112111112111--------------1--1------------1----------11---3----11121---11111-1-111-111----1--11-1---1--1-1111---11---------3---1-4311--31141413111-21 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 440 STR:RPRED 70.0 SQ:SECSTR ########################################################################################################################################################################################EEEcccHHHHHHHTTccHHHHHHHHHHHHTcTTccEHHHHHHHHTTcccHHHHHHHHHHcHHHTTccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEccccEEEEEcccHHHHHHHHHHHTTTTcEEEEcGGGGGGGGcHHHHTcGGHHHHHHHHcccEEEcccccccccTTcccGGGEEEETTHcccTTcEEEccccTTcccccHHHHHHHTTccccccccccEEEEcccHHHHHHTHHHHHHHHHHTccccccccccHcEEEEcccccccGGHGHHHHHHHHHccTTEEEEEccGGGGGTTTccccEETEEEEcTcccTcTEEcEEEcccGHHHHHHHHHHHHHTTcccGGGccEEEEEEcccHHTTcccEEcccEEEEEEcTTcccccEEEHHHHHHHHHHHHHHHHHHHHTHHHHTcccccHHHHHE##### DISOP:02AL 1-2| PSIPRED cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccEEEEEcccHHHHHHHHHHHcccccEEEEEEEccccHHcccEEccEEEcccHHHHHHHHHHccccEEEEEcccccHHHHHHHHHHHHHccccEEEcccHHHHHcccccHHHcccccHHHHcccccccccHHHHHHHHcccEEEEEccccHHHHHHHHHHHHccccEEEEEEcccccHHHHHHHHHHHcccccEEEEEcccccHHHHHHHHHHccccEEEEccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEEccccccccccHHHHHHHHHHHHHHHHHHHHHcccccccEEEEEccccccccccHHHHHHHHHHccccEEEcccccEEEEEEHHHHHHHHHHHHHccccccEEEEcccccEEHHHHHHHHHHHHcccccccccEEEcccccHHHHHcccccHHHHHHHHHccccEEcccccccHHHHHHHHHHHHHHHHHcHHHHHHHHHHHccccccccccc //