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Lactobacillus salivarius UCC118 (lsal0)
Gene : ABD99825.1
DDBJ      :             Conserved hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  24/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
d.58.29
:286 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   167->266 2c0jB PDBj 4e-04 11.2 %
:HMM:SCOP  136->282 1w25A3 d.58.29.2 * 9.3e-07 20.7 %
:HMM:PFM   136->282 PF00990 * GGDEF 3.7e-08 18.9 143/161  
:HMM:PFM   85->116 PF04893 * Yip1 0.00069 25.0 32/173  
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABD99825.1 GT:GENE ABD99825.1 GT:PRODUCT Conserved hypothetical protein GT:DATABASE GIB00337CH01 GT:ORG lsal0 GB:ACCESSION GIB00337CH01 GB:LOCATION complement(1035862..1036722) GB:FROM 1035862 GB:TO 1036722 GB:DIRECTION - GB:PRODUCT Conserved hypothetical protein GB:NOTE COG2199 [T] FOG: GGDEF domain GB:PROTEIN_ID ABD99825.1 GB:DB_XREF GI:90821186 LENGTH 286 SQ:AASEQ MRRNENYSLNTDIYIILLLVCSIMTAIFVGISSNLMILNCVFLAITCFLVLITYFLGLLAGLIFNLLFVFIQGSYVLYADVVLGKELDLWLIVWIFLPLIWSLLVSFMTRNLQKLQEENLSLRESNARNLGYNSETDLRTMRSYRQDAEVFIETHKRFDIPVSTGIISIRYFHQIMNILTEEQQHHLIKRLSDILSESFRNNDIVYSIDGVGGVPQWGVLLFADYDGAMVAMDRIKQRVTTLLREDKELGKYDIQISIGVVEYNEDKIKSVSQFIDSAQHVLQYDV GT:EXON 1|1-286:0| TM:NTM 4 TM:REGION 12->34| TM:REGION 36->58| TM:REGION 61->83| TM:REGION 88->110| SEG 55->68|flgllaglifnllf| RP:PDB:NREP 1 RP:PDB:REP 167->266|2c0jB|4e-04|11.2|98/142| HM:PFM:NREP 2 HM:PFM:REP 136->282|PF00990|3.7e-08|18.9|143/161|GGDEF| HM:PFM:REP 85->116|PF04893|0.00069|25.0|32/173|Yip1| HM:SCP:REP 136->282|1w25A3|9.3e-07|20.7|140/0|d.58.29.2|1/1|Nucleotide cyclase| OP:NHOMO 24 OP:NHOMOORG 24 OP:PATTERN -------------------------------------------------------------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------111111-1--------------------1---------------1-11------------------------------------------------------11111111111-1-------1--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 98 STR:RPRED 34.3 SQ:SECSTR ######################################################################################################################################################################HTccHHHHHHHHHHHHHHHHHHHHccGGGGTTccHHHHHHHHHTHHHHcccccEEEEccccEEEEEETTcGGGccGGGTTT##GGGGTHHHHHHHHHHHH#################### DISOP:02AL 1-6,286-287| PSIPRED ccccccccccHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHccccEEEEEEEcccHHHHHHHccHHHHHHHHHHHHHHHHHHcccccEEEEEccccccEEEEEEccccHHHHHHHHHHHHHHHHHHcccccccccEEEEEEEEEEEEcHHHcccHHHHHHHHHHHHHccc //