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Lactobacillus salivarius UCC118 (lsal0)
Gene : ABD99868.1
DDBJ      :             Cell surface hydrolase, membrane-bound
Swiss-Prot:             

Homologs  Archaea  8/68 : Bacteria  153/915 : Eukaryota  10/199 : Viruses  0/175   --->[See Alignment]
c.69.1
:311 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   204->262 3fobB PDBj 2e-04 33.9 %
:RPS:PDB   81->308 3dyvA PDBj 5e-21 15.4 %
:RPS:SCOP  73->311 2jbwA1  c.69.1.41 * 3e-21 12.1 %
:HMM:SCOP  74->311 1lnsA3 c.69.1.21 * 4e-44 26.5 %
:RPS:PFM   117->311 PF00326 * Peptidase_S9 3e-07 29.3 %
:HMM:PFM   110->311 PF00326 * Peptidase_S9 1.4e-11 20.5 190/213  
:HMM:PFM   78->135 PF12146 * Hydrolase_4 3.2e-07 22.4 58/79  
:BLT:SWISS 82->307 YQKD_BACSU 4e-32 30.1 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABD99868.1 GT:GENE ABD99868.1 GT:PRODUCT Cell surface hydrolase, membrane-bound GT:DATABASE GIB00337CH01 GT:ORG lsal0 GB:ACCESSION GIB00337CH01 GB:LOCATION complement(1083881..1084816) GB:FROM 1083881 GB:TO 1084816 GB:DIRECTION - GB:PRODUCT Cell surface hydrolase, membrane-bound GB:NOTE COG1073 [R] Hydrolases of the alpha/beta superfamily GB:PROTEIN_ID ABD99868.1 GB:DB_XREF GI:90821229 LENGTH 311 SQ:AASEQ MKKRKLIYSLIVGLVILILLGITGGSYYLVSYAFKPDPTVKSGPKGKVDKKLLADQNWLKKQNYQNWYEESATDNLKLRAIYLPAENKTNKTIIVAHGYKGEAMHMARYIRLFHNLGYNVLAPDDRASGQSQGKYITFGWPDRLDYMKWIKQVIAKKGSDSQIGLFGVSMGGATVMMVSGERLPKQVKAIVEDCGYSSIESELSEQLKQQFNLPKEPMITAARIMGTIRVGYDFGKGSSTKQLEKNKLPIFFIHGDSDTFVPTKMVYENYKATSAPKKLWVTKNTGHANSYNNHPKEYQKRVNEFFNKYLK GT:EXON 1|1-311:0| BL:SWS:NREP 1 BL:SWS:REP 82->307|YQKD_BACSU|4e-32|30.1|226/305| TM:NTM 2 TM:REGION 6->28| TM:REGION 160->182| SEG 6->29|liyslivglvilillgitggsyyl| BL:PDB:NREP 1 BL:PDB:REP 204->262|3fobB|2e-04|33.9|59/274| RP:PDB:NREP 1 RP:PDB:REP 81->308|3dyvA|5e-21|15.4|228/238| RP:PFM:NREP 1 RP:PFM:REP 117->311|PF00326|3e-07|29.3|181/208|Peptidase_S9| HM:PFM:NREP 2 HM:PFM:REP 110->311|PF00326|1.4e-11|20.5|190/213|Peptidase_S9| HM:PFM:REP 78->135|PF12146|3.2e-07|22.4|58/79|Hydrolase_4| GO:PFM:NREP 2 GO:PFM GO:0006508|"GO:proteolysis"|PF00326|IPR001375| GO:PFM GO:0008236|"GO:serine-type peptidase activity"|PF00326|IPR001375| RP:SCP:NREP 1 RP:SCP:REP 73->311|2jbwA1|3e-21|12.1|231/359|c.69.1.41| HM:SCP:REP 74->311|1lnsA3|4e-44|26.5|234/0|c.69.1.21|1/1|alpha/beta-Hydrolases| OP:NHOMO 233 OP:NHOMOORG 171 OP:PATTERN --1-1-----------1-------------------------------------11-111-------- -1---------------------------------------------------------------------1111111----------1111-------------1------------------------------11111---1-----------------------1-1-------------------1111111112122212221112211122-112132111111111-------------------223122121115511221131122221111111--------------1111111111111---------1---1-221222212111--11221-11---1--11---1---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1---------------------2-------------------------1-11-1----------------------------------------------------------------1-----------------------------------------------------------------------------------------------------------1----------------------------------1-1--------------------------------------------------122--1----------------3---3--------1-----------------1-- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------1----1---7--------1-11--1212- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 280 STR:RPRED 90.0 SQ:SECSTR ###############################HHEEcTTTccEEEEEETTccccTTTTcccccccccEEEEETTEEEEEEEcccccEccccEEEEEEccTTccGGGGHHHHHHHHHTTcEEEEcccTTcccccTHHHHHHccHHHHHHHHHHHHHHHHTTccEEEEEEETHHHHHHHHHHHHcccccEEEEEccccccccccHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHTGGGccccEEEEEETTcccccTTHHHHHHHTTcccEEEEEETTccccTTTcTTHHHHHHHHHHHHHcHTc DISOP:02AL 1-3| PSIPRED ccHHHHHHHHHHHHHHHHHHHcccccEEEEEEEEcccccccccccccccHHHHcccHHcccccccEEEEEEccccEEEEEEEEEccccccEEEEEEccccccHHHHHHHHHHHHHcccEEEEEccccccccccccccccHHHHHHHHHHHHHHHHccccccEEEEEEEcHHHHHHHHHHHHccccccEEEEEccccccHHHHHHHHHHHHHccHHHHHHHHHHHHHHHcccccHHHccHHHHHHHccccEEEEEEcccccccHHHHHHHHHHcccccEEEEEccccccccccccHHHHHHHHHHHHHHHcc //