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Lactobacillus salivarius UCC118 (lsal0)
Gene : ABD99887.1
DDBJ      :             ATPase, AAA family
Swiss-Prot:             

Homologs  Archaea  35/68 : Bacteria  812/915 : Eukaryota  183/199 : Viruses  0/175   --->[See Alignment]
a.80.1c.37.1
:423 amino acids
:PSIPRED
:DISOPRED
:BLT:PDB   8->116 1ixsB PDBj 7e-12 33.3 %
:BLT:PDB   229->418 2r9gL PDBj 2e-66 63.6 %
:RPS:PDB   2->203 2chgB PDBj 4e-26 26.6 %
:RPS:PDB   239->405 3ctdB PDBj 2e-53 42.1 %
:RPS:SCOP  9->235 1qvrA2  c.37.1.20 * 4e-36 30.4 %
:RPS:SCOP  237->419 2r9gA1  a.80.1.2 * 4e-70 67.8 %
:HMM:SCOP  1->228 1qvrA2 c.37.1.20 * 3.2e-44 27.5 %
:RPS:PFM   2->123 PF05496 * RuvB_N 9e-15 38.5 %
:RPS:PFM   252->418 PF12002 * MgsA_C 4e-42 51.2 %
:HMM:PFM   252->418 PF12002 * MgsA_C 1.3e-65 53.0 166/168  
:HMM:PFM   41->143 PF00004 * AAA 2.3e-20 34.7 101/130  
:HMM:PFM   148->220 PF03215 * Rad17 0.00011 23.3 73/498  
:BLT:SWISS 1->417 YRVN_BACSU e-145 61.6 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABD99887.1 GT:GENE ABD99887.1 GT:PRODUCT ATPase, AAA family GT:DATABASE GIB00337CH01 GT:ORG lsal0 GB:ACCESSION GIB00337CH01 GB:LOCATION 1103221..1104492 GB:FROM 1103221 GB:TO 1104492 GB:DIRECTION + GB:PRODUCT ATPase, AAA family GB:NOTE COG2256 [L] ATPase related to the helicase subunit of the Holliday junction resolvase GB:PROTEIN_ID ABD99887.1 GB:DB_XREF GI:90821248 LENGTH 423 SQ:AASEQ MKPLAYRMRPKNIDDVVGQQHLVGPGKIIRRMVEAKLLSSMILYGPPGTGKTSIASAIAGSTKYAFRKMNAATDSKKKLEQVVEEAKFSGTVILLLDEIHRLTKPKQDFLLPHLEDGHIILIGATTENPYISINPAIRSRTQIFEVHPLNEDDIIQAINRAITDKDDGLGELPLQINDDAMHQLAIATHGDLRSTLNALELAAKSTPKNSEGNIVLTLEIIEECMQRKALVQDKDGDAHYNVISALQKSIRGSDVDAALHYLARLIEAEDLPSISRRLITIAYEDIGLANLPAATRTVLAIQAAEKIGFPEARIPLADTVIELCLSPKSNSGISAIDAALSDIRAGNYGDIPDYLKDAHYSGAKELGHGIDYKYPHDYPHDWVKQQYLPNKLKSKQYYHPKQNGRYEESLGKQYHRLKNAQNS GT:EXON 1|1-423:0| BL:SWS:NREP 1 BL:SWS:REP 1->417|YRVN_BACSU|e-145|61.6|417/421| BL:PDB:NREP 2 BL:PDB:REP 8->116|1ixsB|7e-12|33.3|108/315| BL:PDB:REP 229->418|2r9gL|2e-66|63.6|184/188| RP:PDB:NREP 2 RP:PDB:REP 2->203|2chgB|4e-26|26.6|192/222| RP:PDB:REP 239->405|3ctdB|2e-53|42.1|152/158| RP:PFM:NREP 2 RP:PFM:REP 2->123|PF05496|9e-15|38.5|117/232|RuvB_N| RP:PFM:REP 252->418|PF12002|4e-42|51.2|166/167|MgsA_C| HM:PFM:NREP 3 HM:PFM:REP 252->418|PF12002|1.3e-65|53.0|166/168|MgsA_C| HM:PFM:REP 41->143|PF00004|2.3e-20|34.7|101/130|AAA| HM:PFM:REP 148->220|PF03215|0.00011|23.3|73/498|Rad17| GO:PFM:NREP 3 GO:PFM GO:0006281|"GO:DNA repair"|PF05496|IPR008824| GO:PFM GO:0006310|"GO:DNA recombination"|PF05496|IPR008824| GO:PFM GO:0009378|"GO:four-way junction helicase activity"|PF05496|IPR008824| RP:SCP:NREP 2 RP:SCP:REP 9->235|1qvrA2|4e-36|30.4|204/357|c.37.1.20| RP:SCP:REP 237->419|2r9gA1|4e-70|67.8|177/180|a.80.1.2| HM:SCP:REP 1->228|1qvrA2|3.2e-44|27.5|222/0|c.37.1.20|1/1|P-loop containing nucleoside triphosphate hydrolases| OP:NHOMO 1413 OP:NHOMOORG 1030 OP:PATTERN 212-2-2212211111-111121-1--1-1-1-11-1-----1-----1--1----111---11---- 1111111111111111111-11111111111111111111111111111111111112--11111111111111111111121---1-111111111-122221222112--------------11111111111111111221111--1-------111211---11---1112111212111112211111122222222122222311111122211111211111111111111111111111-211111321231233333112211111111111111111111111111111111111111111111111111111111211111111123112211-1121111121122111112111111121111111111111111111111111111111111111-11111111111-1111111111111111111111111111111111111111111-------------------------1-11-11211111112222221111122211111113211111111111111111111121111111111111111111111121111111111111211111221111111111-1211111111111111111-1111111-11111111211111111111111111--1-1111-----11111111111111111-1111111111111111111111112211111111111111111111111112-111111121111--111111111111111111131211111111111111111111111111111111111111111-1111112222111111121111111111121111--11111111--------1-11---1-111-22-111211--11112112111111112 11--221-1--13322222233324423323122221222222222322233232222222243522235333342322335553222-36321213222242231-121525342112111211323-8D4-3242-21413431211-11132433311223213212B-122-121--11-132242121243341 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 421-424| PSIPRED cccHHHHHccccHHHcccHHHHHHHHHHHHHHHHcccccEEEEEccccccHHHHHHHHHHHHcccEEEEEcccHHHHHHHHHHHHHHHccccEEEEEccccccHHHHHHHHHHHHcccEEEEEEEEccccccccHHHHccEEEEEEEEccHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHccccHHHHHHHHHHHHHHccccccccEEEcHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHccccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHccccccccHHHcccHHHHHHccccccccccccccccEEHHHcccHHHccccccccccccHHHHHHHHHHHHHHHHccc //