[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Lactobacillus salivarius UCC118 (lsal0)
Gene : ABD99890.1
DDBJ      :             DNA-3-methyladenine glycosylase
Swiss-Prot:             

Homologs  Archaea  3/68 : Bacteria  559/915 : Eukaryota  9/199 : Viruses  0/175   --->[See Alignment]
a.96.1
:183 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   2->179 1lmzA PDBj 1e-47 49.7 %
:RPS:PDB   14->95 2dclB PDBj 1e-20 17.1 %
:RPS:SCOP  2->180 1lmzA  a.96.1.4 * 4e-60 49.4 %
:HMM:SCOP  2->185 1lmzA_ a.96.1.4 * 1.4e-70 54.6 %
:RPS:PFM   8->180 PF03352 * Adenine_glyco 1e-61 58.4 %
:HMM:PFM   5->180 PF03352 * Adenine_glyco 2.1e-78 54.9 175/179  
:BLT:SWISS 2->179 3MGA_HAEIN 1e-47 46.3 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABD99890.1 GT:GENE ABD99890.1 GT:PRODUCT DNA-3-methyladenine glycosylase GT:DATABASE GIB00337CH01 GT:ORG lsal0 GB:ACCESSION GIB00337CH01 GB:LOCATION complement(1105749..1106300) GB:FROM 1105749 GB:TO 1106300 GB:DIRECTION - GB:PRODUCT DNA-3-methyladenine glycosylase GB:NOTE COG2094 [L] 3-methyladenine DNA glycosylase GB:PROTEIN_ID ABD99890.1 GB:DB_XREF GI:90821251 LENGTH 183 SQ:AASEQ MKCAWIYGADQLMIDYHDKEWGRPLHDERGLFELLCLEGLQAGLSWKIVLNKRKFLREAFDNFEVEKISQYTLDDVEKLLTDPRIIRNRRKIEAIINNAKIVNALHERNESLDSFFWGIINNQPIINNFKNPEEIPTKTKLSEQISKTLKKMGFKFVGPTIVYSFMEASGMVNDHLVGCYGRN GT:EXON 1|1-183:0| BL:SWS:NREP 1 BL:SWS:REP 2->179|3MGA_HAEIN|1e-47|46.3|177/185| BL:PDB:NREP 1 BL:PDB:REP 2->179|1lmzA|1e-47|49.7|177/187| RP:PDB:NREP 1 RP:PDB:REP 14->95|2dclB|1e-20|17.1|76/98| RP:PFM:NREP 1 RP:PFM:REP 8->180|PF03352|1e-61|58.4|173/179|Adenine_glyco| HM:PFM:NREP 1 HM:PFM:REP 5->180|PF03352|2.1e-78|54.9|175/179|Adenine_glyco| GO:PFM:NREP 2 GO:PFM GO:0006284|"GO:base-excision repair"|PF03352|IPR005019| GO:PFM GO:0008725|"GO:DNA-3-methyladenine glycosylase I activity"|PF03352|IPR005019| RP:SCP:NREP 1 RP:SCP:REP 2->180|1lmzA|4e-60|49.4|178/187|a.96.1.4| HM:SCP:REP 2->185|1lmzA_|1.4e-70|54.6|183/187|a.96.1.4|1/1|DNA-glycosylase| OP:NHOMO 632 OP:NHOMOORG 571 OP:PATTERN ---------------------------------1---------------1-----------------1 --1-111222211111111-11111111111111111111111111-2-111111111--111-1121111-----11--11------1111-1--1--1-11111-1-1--------------1---------------------1-------------------------------------------11-----------------11----------11-11111111-11111111111111111111212-22-111133112221211111-11111111111111111111111111111111112112111111--1-1---1-11---1----------1-1----11--------111------111111111111111111111111111111-111-11111111111-11121111111111112111111111111111111-----111--------------------------------1--111121111112111111121111111111111--111-11111-1-1-11--1-11-1111111----11-2111-11-11111-1-11-11-11111--1--211--------1--------1-----1111111111-1111111111111111111------1------1111111111111-111-1111111111111111111111111111111111111111111111111111-111111111111---111111111111212111111-1111---11111111---11111111121111111111----1----111111111111111111211111-------1----11----------1----1-------------1-----------------11 ----11------------------------------------------------------------------------------------------------------------------------------------------------------------------------1----------256D-73------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 178 STR:RPRED 97.3 SQ:SECSTR #ccccc#cHHHHHEETTcEETTEEHcccccHHHHHHHHHHHTTccccEEEEccccccccccccEEEEEEEEEHHHHHHHHcccEEEEEEEEEcccHHHHHHHHHHTHTTccHHHHHHHTTTTccEEcccccTTTcccccHHHHHHHHHHHHHTcccccHHHHHHHHHHHTcEEcccTTcT### DISOP:02AL 183-184| PSIPRED ccccccccccHHHHHHHHHHcccccccHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHcccHHHHHHccHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHccccccccccccHHHcccccHHHHHHHHHHHHHHcccccHHHHHHHHHHcccccHHHccccccc //