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Lactobacillus salivarius UCC118 (lsal0)
Gene : ABD99917.1
DDBJ      :             Endonuclease involved in recombination
Swiss-Prot:RUVX_LACS1   RecName: Full=Putative Holliday junction resolvase;         EC=3.1.-.-;

Homologs  Archaea  0/68 : Bacteria  636/915 : Eukaryota  2/199 : Viruses  0/175   --->[See Alignment]
c.55.3
:143 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   1->134 1vhxB PDBj 1e-33 55.9 %
:RPS:SCOP  1->134 1vhxA  c.55.3.8 * 3e-45 54.9 %
:HMM:SCOP  1->136 1nu0A_ c.55.3.8 * 1.5e-38 49.6 %
:RPS:PFM   1->134 PF03652 * UPF0081 1e-31 55.7 %
:HMM:PFM   1->133 PF03652 * UPF0081 3.8e-44 47.7 130/135  
:BLT:SWISS 1->143 RUVX_LACS1 6e-77 100.0 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABD99917.1 GT:GENE ABD99917.1 GT:PRODUCT Endonuclease involved in recombination GT:DATABASE GIB00337CH01 GT:ORG lsal0 GB:ACCESSION GIB00337CH01 GB:LOCATION complement(1136102..1136533) GB:FROM 1136102 GB:TO 1136533 GB:DIRECTION - GB:PRODUCT Endonuclease involved in recombination GB:NOTE COG0816 [L] Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) GB:PROTEIN_ID ABD99917.1 GB:DB_XREF GI:90821278 LENGTH 143 SQ:AASEQ MGLDVGSRTVGVAVSDMLGWTAQGVEIVQINEDEQEFGLDRIAELVKENEVVGFVLGLPKNMNNTSGPRVEAAKAYGELLEEKFNLPIDFIDERLTTVEAERMLVEQADASRKKRKKVIDKLAASLILQNYLDAKGKLLKELN GT:EXON 1|1-143:0| SW:ID RUVX_LACS1 SW:DE RecName: Full=Putative Holliday junction resolvase; EC=3.1.-.-; SW:GN OrderedLocusNames=LSL_1109; SW:KW Complete proteome; Cytoplasm; DNA damage; DNA recombination;DNA repair; Hydrolase; Nuclease. SW:EXACT F SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->143|RUVX_LACS1|6e-77|100.0|143/147| GO:SWS:NREP 6 GO:SWS GO:0005737|"GO:cytoplasm"|Cytoplasm| GO:SWS GO:0006974|"GO:response to DNA damage stimulus"|DNA damage| GO:SWS GO:0006310|"GO:DNA recombination"|DNA recombination| GO:SWS GO:0006281|"GO:DNA repair"|DNA repair| GO:SWS GO:0016787|"GO:hydrolase activity"|Hydrolase| GO:SWS GO:0004518|"GO:nuclease activity"|Nuclease| BL:PDB:NREP 1 BL:PDB:REP 1->134|1vhxB|1e-33|55.9|127/132| RP:PFM:NREP 1 RP:PFM:REP 1->134|PF03652|1e-31|55.7|131/134|UPF0081| HM:PFM:NREP 1 HM:PFM:REP 1->133|PF03652|3.8e-44|47.7|130/135|UPF0081| GO:PFM:NREP 5 GO:PFM GO:0005737|"GO:cytoplasm"|PF03652|IPR005227| GO:PFM GO:0006281|"GO:DNA repair"|PF03652|IPR005227| GO:PFM GO:0006310|"GO:DNA recombination"|PF03652|IPR005227| GO:PFM GO:0006974|"GO:response to DNA damage stimulus"|PF03652|IPR005227| GO:PFM GO:0016788|"GO:hydrolase activity, acting on ester bonds"|PF03652|IPR005227| RP:SCP:NREP 1 RP:SCP:REP 1->134|1vhxA|3e-45|54.9|133/140|c.55.3.8| HM:SCP:REP 1->136|1nu0A_|1.5e-38|49.6|133/0|c.55.3.8|1/1|Ribonuclease H-like| OP:NHOMO 639 OP:NHOMOORG 638 OP:PATTERN -------------------------------------------------------------------- 111-111-111111-1111-11--111111111---11---111-1-1-11111--------11111--1-11111111-11---1111111-1111---1-----11-111111111-1----1-----------111111111111111111111------1-111111----111-1--1-----11-11111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111-111111111111111111111111111111111111111111111111111111111111111111111111111111111111--111111111111111111111111111111111-111111111111111111-111111-111111111111111111111-111-111111-111---111111111111111-----11111----1111111-----1111-----1111-1----111-------------1111-111111111-11-11-----1----1-------------11111-1--------------------------111111-1111111111111111111111111---11-1---11111111111111111111-1111111111111111111111111111111111111111111111111111-111111111111111111111111111-11111111111111--1---------11-1111111111111-111---------1----------------------------11------------------1111-1--1111--111-1-----------------111 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------11----------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 134 STR:RPRED 93.7 SQ:SECSTR EEEEEcccEEEEEEEcTTcccEEEEEEEEccGGGTcccHHHHHHHTccccEEEEEEEcccccTTcccHHHHHHHHHHHHHHHHHTccEEEEcccccHHcHHHHHHccTTccHHHHHHHHHHHHTHHHHHHHHTT######### DISOP:02AL 107-116,135-144| PSIPRED cEEEccccEEEEEEEccccccccccEEEEEccccHHHHHHHHHHHHHHHcccEEEEEccccccccccHHHHHHHHHHHHHHHHHcccEEEEcccccHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHcHHHHcccc //