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Lactobacillus salivarius UCC118 (lsal0)
Gene : ABD99923.1
DDBJ      :             Conserved hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  118/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
c.124.1
:243 amino acids
:PSIPRED
:DISOPRED
:HMM:SCOP  48->241 2g40A1 c.124.1.7 * 1.9e-35 32.7 %
:RPS:PFM   139->232 PF02589 * DUF162 3e-14 38.3 %
:HMM:PFM   136->240 PF02589 * DUF162 1.3e-22 32.4 105/109  
:HMM:PFM   72->112 PF04320 * DUF469 0.00063 24.4 41/101  
:HMM:PFM   32->77 PF01256 * Carb_kinase 0.00049 36.6 41/242  
:BLT:SWISS 12->240 LUTC_BACCQ 6e-40 41.8 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABD99923.1 GT:GENE ABD99923.1 GT:PRODUCT Conserved hypothetical protein GT:DATABASE GIB00337CH01 GT:ORG lsal0 GB:ACCESSION GIB00337CH01 GB:LOCATION complement(1144242..1144973) GB:FROM 1144242 GB:TO 1144973 GB:DIRECTION - GB:PRODUCT Conserved hypothetical protein GB:NOTE COG0011 [S] Uncharacterized conserved protein GB:PROTEIN_ID ABD99923.1 GB:DB_XREF GI:90821284 LENGTH 243 SQ:AASEQ MSKLLDKANSKENREAFLNRISKKAGRPRHQVKEFKPLNDLPDKVLINKSNDELLEIAKENSESVNAKVIIKKKDELAKFLKEYIEKIEAKKLMLPSFGDEKWENFHLKEWLNNSGAEKVDYWTNDLSRMENENLANDADIAIGFADYLIANTGTITVTVSPEQGRGFNFLPTHYLALVPKSGLVPSTRVAVENYEKRLGSKELETSAINFISGPSNSGDIEMELVVGVHGPLDCTYLVVEDM GT:EXON 1|1-243:0| BL:SWS:NREP 1 BL:SWS:REP 12->240|LUTC_BACCQ|6e-40|41.8|225/236| RP:PFM:NREP 1 RP:PFM:REP 139->232|PF02589|3e-14|38.3|94/109|DUF162| HM:PFM:NREP 3 HM:PFM:REP 136->240|PF02589|1.3e-22|32.4|105/109|DUF162| HM:PFM:REP 72->112|PF04320|0.00063|24.4|41/101|DUF469| HM:PFM:REP 32->77|PF01256|0.00049|36.6|41/242|Carb_kinase| HM:SCP:REP 48->241|2g40A1|1.9e-35|32.7|171/0|c.124.1.7|1/1|NagB/RpiA/CoA transferase-like| OP:NHOMO 135 OP:NHOMOORG 118 OP:PATTERN -------------------------------------------------------------------- --1---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1122222112121211211111111211111-1------111-------------------1---11-------1111-1----111---------------------------------------------------------------------------1-11-1-----------1--1------------------------------------------------------------------1----------------------------------------------------------------------------11--------1---------------------------------------1-1------11-11222-----------------1-------------------------------------1--------------------------------1-211--1111111111-111111211111111-11----1---2------------------1-1111--------------------------------1111111----1111------------------------------------------2----------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 1-1,27-34| PSIPRED ccHHHHHHHcHHHHHHHHHHHHHHcccccccccccccHHHccccccccccHHHHHHHHHHHHHHHccEEEEEcHHHHHHHHHHHHHHccccEEEEccccHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHcccEEEEEEEEEEEcccEEEEEccccccHHHHHcccEEEEEEEHHHHcccHHHHHHHHHHHHHccccccccEEEEEcccccccccEEEEccccccEEEEEEEEEcc //