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Lactobacillus salivarius UCC118 (lsal0)
Gene : ABD99926.1
DDBJ      :             Amino acid permease
Swiss-Prot:             

Homologs  Archaea  28/68 : Bacteria  481/915 : Eukaryota  122/199 : Viruses  0/175   --->[See Alignment]
:478 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   28->408 3gi9C PDBj 2e-10 21.6 %
:RPS:PFM   34->442 PF00324 * AA_permease 2e-29 32.1 %
:HMM:PFM   36->466 PF00324 * AA_permease 7.9e-39 23.4 406/479  
:BLT:SWISS 47->475 YHDG_BACSU 2e-45 31.6 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABD99926.1 GT:GENE ABD99926.1 GT:PRODUCT Amino acid permease GT:DATABASE GIB00337CH01 GT:ORG lsal0 GB:ACCESSION GIB00337CH01 GB:LOCATION complement(1147613..1149049) GB:FROM 1147613 GB:TO 1149049 GB:DIRECTION - GB:PRODUCT Amino acid permease GB:NOTE COG0531 [E] Amino acid transporters GB:PROTEIN_ID ABD99926.1 GB:DB_XREF GI:90821287 LENGTH 478 SQ:AASEQ MANFFKRLFAKEDPSVYQKKDAHLIQVLTVKDFLALGVGTIVSTSIFTLPGVVAANYAGPAVAISFLVAAVVAGLVAFAYAEMSSAMPFAGSAFSWISVVFGEFFGWIAGWALLAEYFIAVAFVGSGFSANIRGLLAPIGFNLPASLSNPFGTNGGIVDLMSLVVILLVAFLLSRGVSEAARVENALVILKVFAIILFIIVGATAVKASNYVPFIPEHRLNADGTHFGGWQGIYAGVSSIFLSYIGFDSIAANAAEAKNPSKTMPRGILGSLLIAVVLFVAVALVLVGMFKYSSYAGNAEPVGWALRKAGHGVIASVVQAIAVFGMFTALIGMMMAGSRLLYSFGRDGLLSKWLGVLNENNLPNHALFVLTVIAVILGAFFPFQVLSQLISAGTLIAFMFVSLGIYALRPREGKDLPVPGFKMPLYPVLPALAFIGALIVFLGLDIEAKEYSLYWFIIGVVVYIVYGMHHSNLQKNLK GT:EXON 1|1-478:0| BL:SWS:NREP 1 BL:SWS:REP 47->475|YHDG_BACSU|2e-45|31.6|415/465| TM:NTM 12 TM:REGION 27->49| TM:REGION 60->82| TM:REGION 97->119| TM:REGION 153->175| TM:REGION 183->205| TM:REGION 234->256| TM:REGION 268->290| TM:REGION 315->337| TM:REGION 355->377| TM:REGION 388->409| TM:REGION 424->445| TM:REGION 450->472| SEG 66->81|flvaavvaglvafaya| SEG 272->287|lliavvlfvavalvlv| SEG 457->467|iigvvvyivyg| BL:PDB:NREP 1 BL:PDB:REP 28->408|3gi9C|2e-10|21.6|352/437| RP:PFM:NREP 1 RP:PFM:REP 34->442|PF00324|2e-29|32.1|389/429|AA_permease| HM:PFM:NREP 1 HM:PFM:REP 36->466|PF00324|7.9e-39|23.4|406/479|AA_permease| GO:PFM:NREP 3 GO:PFM GO:0006810|"GO:transport"|PF00324|IPR004841| GO:PFM GO:0016020|"GO:membrane"|PF00324|IPR004841| GO:PFM GO:0055085|"GO:transmembrane transport"|PF00324|IPR004841| OP:NHOMO 1879 OP:NHOMOORG 631 OP:PATTERN ------2-11111---12-----132221123--1--------31--1--112----1-1-2--1--- 335121-----12-52222-22--44222222255525A9----3131-22-5452-5--1-2-23B74513222233----3-1-1111-111-----2-221-52542----------------1111--11--------------------------------1-----------------------1127778786784687988--224A7875232-51222223512111111111111112112234724424344777744454223111---21112221111111111122222222222221122222221---32111112111--3442221--------111111--11-4--31---4-12222-----21--1---12---------------33133132-1------1---1--1---1-----------3333333322223-------------111111111111111-----11223-----7666673434377426656338723313-1331-----11-11-----11231-------111-------1-----------------1------1------------------1------2---111---1---1-------1------1---11--1---------11222112221211123-22221113-2211222222222342321-111111111111113221---2--422122122222--1------11111-1-2---------------5555443----156351312-26131-11---1--------------------33434333463333----22------------1----------------------------1--------1-- ----32----1-6511------11111111111-1-1---------211111-1--1-----1------1----1-----1------1---------------212----6EG7BC94435544BA475BQ7176A3533E35E624434B438478876Kg33532A36K3351121-611143789F-96138787- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 375 STR:RPRED 78.5 SQ:SECSTR ###########################ccHHHHHHHHHHHHHHHHTTTTHHHHHHHHTGGGHHHHHHHHHHHHHHHHHHHHHHTTTcccTTTHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTccccHTTccccHHcHHHHHHHHHHHHHHHHHHHHTTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTcccHHHHcccccHHHHHccccTTTH##HHHHHHHHTTGGGTHHHHHHTTGGGcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTccHHHHHHTcTTHHHHHTHHHHcHHHHHHHHHHHHHHHHHHHHHHTTTHHHHHHHHHHccccccc####cTTccTHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHT###################################################################### DISOP:02AL 1-1,8-28,474-479| PSIPRED cHHHHHHHHcccccccccccccHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHcccccHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHccHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccc //