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Lactobacillus salivarius UCC118 (lsal0)
Gene : ABD99946.1
DDBJ      :             Transcriptional regulator
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  301/915 : Eukaryota  2/199 : Viruses  0/175   --->[See Alignment]
d.116.1
:171 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   22->170 2dxaA PDBj 5e-09 27.5 %
:RPS:PDB   17->167 2cx5A PDBj 8e-25 18.1 %
:RPS:SCOP  17->167 1dbuA  d.116.1.1 * 2e-31 30.6 %
:HMM:SCOP  13->167 1dbxA_ d.116.1.1 * 5.3e-34 32.7 %
:RPS:PFM   41->156 PF04073 * YbaK 1e-11 36.9 %
:HMM:PFM   36->159 PF04073 * YbaK 1.1e-30 38.8 121/123  
:BLT:SWISS 17->171 EBSC_ENTFA 4e-23 40.0 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABD99946.1 GT:GENE ABD99946.1 GT:PRODUCT Transcriptional regulator GT:DATABASE GIB00337CH01 GT:ORG lsal0 GB:ACCESSION GIB00337CH01 GB:LOCATION complement(1172059..1172574) GB:FROM 1172059 GB:TO 1172574 GB:DIRECTION - GB:PRODUCT Transcriptional regulator GB:NOTE COG0011 [S] Uncharacterized conserved protein GB:PROTEIN_ID ABD99946.1 GB:DB_XREF GI:90821307 LENGTH 171 SQ:AASEQ MAKKKKKTKEKKTNEERVLDQHNIEYEETSFNWIEQGKDALKEAAELGVEPESILKTIVLQGKGDPKDFFVVCLPIVHEMDLKLVAQQLGKKQVHLADNKNLINITGYIHGANTPIGIHAFKGFPIYFDERIKPFEIISVSAGKVGRSVRLKQEDLVKLVNGKYIEVERKE GT:EXON 1|1-171:0| BL:SWS:NREP 1 BL:SWS:REP 17->171|EBSC_ENTFA|4e-23|40.0|150/164| SEG 3->16|kkkkktkekktnee| BL:PDB:NREP 1 BL:PDB:REP 22->170|2dxaA|5e-09|27.5|138/154| RP:PDB:NREP 1 RP:PDB:REP 17->167|2cx5A|8e-25|18.1|144/157| RP:PFM:NREP 1 RP:PFM:REP 41->156|PF04073|1e-11|36.9|111/122|YbaK| HM:PFM:NREP 1 HM:PFM:REP 36->159|PF04073|1.1e-30|38.8|121/123|YbaK| RP:SCP:NREP 1 RP:SCP:REP 17->167|1dbuA|2e-31|30.6|144/152|d.116.1.1| HM:SCP:REP 13->167|1dbxA_|5.3e-34|32.7|153/157|d.116.1.1|1/1|YbaK/ProRS associated domain| OP:NHOMO 304 OP:NHOMOORG 303 OP:PATTERN -------------------------------------------------------------------- 111-1------------------------------------------1------------1-----------------1111------1111-111-----------------------------------------------------------------------111----------------------111111111111111111----11111--1-1111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111-11-1-------1-111---1211--11111--11-1------------1----------------------------------------------------------------------------11111111--------------------------------------------11-1------------------------------------1-111----------111111-11------1-1-1---1-1----1--1---11111111--111-1----------------1-----------------1111---1111-1--1---------------1-----11111111111-11111111-1111111111---11-11----------------11111111--111111111111--------------1--1111---11111----11111-1---------1111-1111-----------------1-----111--1-----------------------------------------------------------------------1 -1------------------------------------------------------------------------------------------------------------------------------------------------------------1---------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 155 STR:RPRED 90.6 SQ:SECSTR ################HHHHHTTcTTccEEEcccTTcccHHHHHHHHTccGGGEEEEEEEEccccEETTEEEEEETTccccHHHHHHHHTccccEEccHHHHHHHHcccTTccccccccccccccEEEEGGGGGcccEEEEcccTTEEEEEcHHHHHHHHccEEEccEEcc DISOP:02AL 1-17,171-172| PSIPRED cccHHHHHHHHHccHHHHHHHccccEEEEEEccccccccHHHHHHHccccHHHEEEEEEEEEcccccEEEEEEEEcccEEcHHHHHHHHcccccEEccHHHHHHHccccccccccccccccccccEEEEHHHHccccEEEccccccEEEEEcHHHHHHHHccEEEEEEEcc //